RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 CLHC1Q8NHS4 586 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 NAT14Q8WUY8 206 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 TWIST2Q8WVJ9 160 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 POP5Q969H6 163 aaKnown RBP1.43□□□□□ -2.18
RAP1B-224ENST00000541216 CMBLQ96DG6 245 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 VAT1Q99536 393 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 SYT4Q9H2B2 425 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 C16orf95Q9H693 158 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 CISHQ9NSE2 258 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 SDHAF2Q9NX18 166 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 DNAJC27Q9NZQ0 273 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 LINC00588Q9Y4M8 146 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 EML6Q6ZMW3 1958 aa1.43□□□□□ -2.18
RAP1B-224ENST00000541216 FREM3P0C091 2139 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
RAP1B-224ENST00000541216 DNAH6Q9C0G6 4158 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 TRGV4A0A0C4DH28 118 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 H0YC42 278 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 M0QXV9 152 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 SH2D1AO60880 128 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 POP7O75817 140 aaKnown RBP1.42□□□□□ -2.18
RAP1B-224ENST00000541216 OTCP00480 354 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 CA2P00918 260 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 HLA-DRAP01903 254 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 IGKV1-16P04430 117 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 PEBP1P30086 187 aaKnown RBP1.42□□□□□ -2.18
RAP1B-224ENST00000541216 CDK9P50750 372 aaKnown RBP1.42□□□□□ -2.18
RAP1B-224ENST00000541216 PSG4Q00888 419 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 C10orf91Q5T1B1 145 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 RESP18Q5W5W9 173 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 LGALS9CQ6DKI2 356 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 NOXRED1Q6NXP6 359 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 SYS1Q8N2H4 156 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 DRAXINQ8NBI3 349 aaPredicted RBP1.42□□□□□ -2.18
RAP1B-224ENST00000541216 DOHHQ9BU89 302 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 POTEKPQ9BYX7 375 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 TUBA4BQ9H853 241 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
RAP1B-224ENST00000541216 HEATR5AQ86XA9 2040 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 TRAV8-3A0A0A6YYJ7 113 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 C1orf232A0A0U1RR37 186 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 NUPR2A6NF83 97 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 C17orf98A8MV24 154 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 ATP6V1G2-DDX39BF2Z307 99 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 H3BP45 60 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 SC5DO75845 299 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 STAG3L2P0CL84 134 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 P0DMU3 169 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 FAM231AP0DMU4 169 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 FAM231CP0DMU5 169 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 PSMB9P28065 219 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 EVI2BP34910 448 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 DEKP35659 375 aaKnown RBP1.41□□□□□ -2.18
RAP1B-224ENST00000541216 IDH3GP51553 393 aaPredicted RBP1.41□□□□□ -2.18
RAP1B-224ENST00000541216 RAB38P57729 211 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 AP1S1P61966 158 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 MMDQ15546 238 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 HSP90AA4PQ58FG1 418 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 ELP2Q6IA86 826 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 FAHD1Q6P587 224 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 SCIMPQ6UWF3 145 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 PID1Q7Z2X4 250 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 C2orf73Q8N5S3 287 aaPredicted RBP1.41□□□□□ -2.18
RAP1B-224ENST00000541216 TMEM86BQ8N661 226 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 OR13C9Q8NGT0 318 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 FNDC9Q8TBE3 224 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.41□□□□□ -2.18
RAP1B-224ENST00000541216 REEP6Q96HR9 211 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 DRC3Q9H069 523 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 SLC25A31Q9H0C2 315 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 RAB1BQ9H0U4 201 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 DYNLRB1Q9NP97 96 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 DIABLOQ9NR28 239 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 AGPAT3Q9NRZ7 376 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 C15orf41Q9Y2V0 281 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 HSPE1-MOB4S4R3N1 261 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
RAP1B-224ENST00000541216 IGHV2-26A0A0B4J1V2 119 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 ZNF860A6NHJ4 632 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 IFNA6P05013 189 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 PSKH1P11801 424 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 BGNP21810 368 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 S100A2P29034 98 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 SPINT3P49223 89 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 CTBP2P56545 445 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 BRMS1LQ5PSV4 323 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 NXNL2Q5VZ03 156 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 RIBC1Q8N443 379 aaPredicted RBP1.4□□□□□ -2.19
RAP1B-224ENST00000541216 SPICQ8N5J4 248 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 KRTCAP2Q8N6L1 136 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 OR4A5Q8NH83 315 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 C1QTNF6Q9BXI9 259 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 ARL6Q9H0F7 186 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 RNF122Q9H9V4 155 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 ZNF286AQ9HBT8 521 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 RMND1Q9NWS8 449 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 USH1CQ9Y6N9 552 aa1.4□□□□□ -2.19
RAP1B-224ENST00000541216 GOLGA8QA0A0J9YX86 632 aa1.39□□□□□ -2.19
RAP1B-224ENST00000541216 MGAT4DA6NG13 374 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms