RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SSX9Q7RTT3 188 aa19.77■□□□□ 0.76
CHFR-218ENST00000540963 TAS2R8Q9NYW2 309 aa19.77■□□□□ 0.76
CHFR-218ENST00000540963 IGHV3-35A0A0C4DH35 117 aa19.76■□□□□ 0.75
CHFR-218ENST00000540963 RBFOX2O43251 390 aaKnown RBP eCLIP19.76■□□□□ 0.751e-11■■■□□ 15.8
CHFR-218ENST00000540963 MXD1Q05195 221 aa19.76■□□□□ 0.75
CHFR-218ENST00000540963 SPSB3Q6PJ21 355 aa19.76■□□□□ 0.75
CHFR-218ENST00000540963 RPL35AP18077 110 aaKnown RBP19.75■□□□□ 0.75
CHFR-218ENST00000540963 THOC7Q6I9Y2 204 aaKnown RBP19.75■□□□□ 0.75
CHFR-218ENST00000540963 BSCL2Q96G97 398 aaPredicted RBP19.75■□□□□ 0.75
CHFR-218ENST00000540963 C11orf68Q9H3H3 251 aaKnown RBP19.75■□□□□ 0.75
CHFR-218ENST00000540963 Q9H521 79 aa19.75■□□□□ 0.75
CHFR-218ENST00000540963 HRASLSQ9HDD0 168 aa19.75■□□□□ 0.75
CHFR-218ENST00000540963 RHBDL2Q9NX52 303 aa19.75■□□□□ 0.75
CHFR-218ENST00000540963 K7EMT4 169 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 NDUFA4O00483 81 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 IFNA4P05014 189 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 PTHLHP12272 177 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 CMC4P56277 68 aaPredicted RBP19.74■□□□□ 0.75
CHFR-218ENST00000540963 POU2AF1Q16633 256 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 COMMD5Q9GZQ3 224 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 ANXA10Q9UJ72 324 aa19.74■□□□□ 0.75
CHFR-218ENST00000540963 KIAA1109Q2LD37 5005 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 TGFBR1P36897 503 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 TAS2R31P59538 309 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 HSD17B13Q7Z5P4 300 aaPredicted RBP19.73■□□□□ 0.75
CHFR-218ENST00000540963 GVQW1Q8N7I0 195 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 ZBTB34Q8NCN2 500 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 C11orf45Q8TAV5 145 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 CSTL1Q9H114 145 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 DNAH6Q9C0G6 4158 aa19.73■□□□□ 0.75
CHFR-218ENST00000540963 SCGNO76038 276 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 S1PR2O95136 353 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 FCGR2BP31994 310 aaPredicted RBP19.72■□□□□ 0.75
CHFR-218ENST00000540963 RBMS2Q15434 407 aaKnown RBP19.72■□□□□ 0.75
CHFR-218ENST00000540963 NEDD8Q15843 81 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 SPAG16Q8N0X2 631 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 GPHA2Q96T91 129 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 RARRES2Q99969 163 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 VPS13DQ5THJ4 4388 aa19.72■□□□□ 0.75
CHFR-218ENST00000540963 LOC100506127A0A0U1RQW1 187 aa19.71■□□□□ 0.75
CHFR-218ENST00000540963 MPTX1A8MV57 137 aa19.71■□□□□ 0.75
CHFR-218ENST00000540963 ADMP35318 185 aa19.71■□□□□ 0.75
CHFR-218ENST00000540963 GDPD1Q8N9F7 314 aa19.71■□□□□ 0.75
CHFR-218ENST00000540963 QTRT1Q9BXR0 403 aaKnown RBP19.71■□□□□ 0.75
CHFR-218ENST00000540963 TRAV18A0A075B6X5 111 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 UPK2O00526 184 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 HPRT1P00492 218 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 NQO2P16083 231 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 GNG2P59768 71 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 KCTD21Q4G0X4 260 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 OR5B3Q8NH48 314 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 CD300LFQ8TDQ1 290 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 C2CD4CQ8TF44 421 aa19.7■□□□□ 0.74
CHFR-218ENST00000540963 OR2T8A6NH00 312 aa19.69■□□□□ 0.74
CHFR-218ENST00000540963 C15orf62A8K5M9 175 aa19.69■□□□□ 0.74
CHFR-218ENST00000540963 CTSDP07339 412 aaPredicted RBP19.69■□□□□ 0.74
CHFR-218ENST00000540963 RPA2P15927 270 aa19.69■□□□□ 0.74
CHFR-218ENST00000540963 IDNKQ5T6J7 187 aa19.69■□□□□ 0.74
CHFR-218ENST00000540963 SERPINE2P07093 398 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 NANOS2P60321 138 aaKnown RBP19.68■□□□□ 0.74
CHFR-218ENST00000540963 PRR20EP86478 221 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 PRR20CP86479 221 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 PRR20DP86480 221 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 PRR20BP86481 221 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 PRR20AP86496 221 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 CATR1Q13166 79 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 HOGA1Q86XE5 327 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 AUNIPQ9H7T9 357 aa19.68■□□□□ 0.74
CHFR-218ENST00000540963 SCAND1P57086 179 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 SECTM1Q8WVN6 248 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 C20orf24Q9BUV8 137 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 PLEKHA2Q9HB19 425 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 CCL28Q9NRJ3 127 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 C21orf62Q9NYP8 219 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 FBXL17Q9UF56 701 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 ETV7Q9Y603 341 aa19.67■□□□□ 0.74
CHFR-218ENST00000540963 TRAV3A0A0B4J244 114 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 TNFSF12O43508 249 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 FCER2P06734 321 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 SLC25A24Q6NUK1 477 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 APRG1Q8IVJ8 170 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 BEST4Q8NFU0 473 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 OR10W1Q8NGF6 305 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 OR13F1Q8NGS4 319 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 OR11H2Q8NH07 326 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 SMPXQ9UHP9 88 aa19.66■□□□□ 0.74
CHFR-218ENST00000540963 TRAPPC2P0DI81 140 aa19.65■□□□□ 0.74
CHFR-218ENST00000540963 TRAPPC2BP0DI82 140 aa19.65■□□□□ 0.74
CHFR-218ENST00000540963 OR13C7P0DN81 318 aa19.65■□□□□ 0.74
CHFR-218ENST00000540963 CHRDL1Q9BU40 450 aa19.65■□□□□ 0.74
CHFR-218ENST00000540963 TMEM140Q9NV12 185 aa19.65■□□□□ 0.74
CHFR-218ENST00000540963 SULT1C2O00338 296 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 FCGR2CP31995 323 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 ARPC4P59998 168 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 WT1-ASQ06250 92 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 OR1L8Q8NGR8 309 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 SCARB1Q8WTV0 552 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 YIPF6Q96EC8 236 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 COMMD9Q9P000 198 aa19.64■□□□□ 0.73
CHFR-218ENST00000540963 F11RQ9Y624 299 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms