RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR5AN1Q8NGI8 311 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 OR5C1Q8NGR4 320 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 RHOVQ96L33 236 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 CITED4Q96RK1 184 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 PSMG3Q9BT73 122 aaPredicted RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 PBDC1Q9BVG4 233 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 SSBP3Q9BWW4 388 aaPredicted RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 MAGT1Q9H0U3 335 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 MMP26Q9NRE1 261 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 WASHC3Q9Y3C0 194 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 TIMM9Q9Y5J7 89 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 A0A1W2PN81 502 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 FAM24AA6NFZ4 105 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 LINC00473A8K010 186 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 FNDC10F2Z333 226 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 H7C2Y5 167 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 SHOXO15266 292 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 FOXH1O75593 365 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 CRYZL1O95825 349 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TFF1P04155 84 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 RNASE1P07998 156 aaKnown RBP6.75□□□□□ -1.33
CHD4-208ENST00000540960 MSMBP08118 114 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 SELLP14151 372 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 MAS1LP35410 378 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 CHRNA7P36544 502 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TAGLN2P37802 199 aaKnown RBP6.75□□□□□ -1.33
CHD4-208ENST00000540960 CAMLGP49069 296 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 GNG10P50151 68 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 ZNF134P52741 427 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 DLX6P56179 175 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 OR2B8PP59922 312 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 ZNF273Q14593 569 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 RPL39P5Q59GN2 51 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 OR2B11Q5JQS5 317 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 SPANXN5Q5MJ07 72 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 AKR1C8PQ5T2L2 129 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TMEM14EPQ6UXP3 125 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 TCF23Q7RTU1 214 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 C5orf24Q7Z6I8 188 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 LY6G5BQ8NDX9 201 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 ZNF48Q96MX3 618 aaPredicted RBP6.75□□□□□ -1.33
CHD4-208ENST00000540960 TMEM147Q9BVK8 224 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 COMMD5Q9GZQ3 224 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 RBKSQ9H477 322 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 NARFLQ9H6Q4 476 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 HEYLQ9NQ87 328 aaPredicted RBP6.75□□□□□ -1.33
CHD4-208ENST00000540960 TMEM140Q9NV12 185 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 KPTNQ9Y664 436 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 LYSTQ99698 3801 aa6.75□□□□□ -1.33
CHD4-208ENST00000540960 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 IGSF23A1L1A6 192 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 ANKRD34BA5PLL1 514 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 MFSD2BA6NFX1 497 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 C15orf61A6NNL5 157 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 INS-IGF2F8WCM5 200 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 LYNX1G3V0Z9 82 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 KBTBD11O94819 623 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 LYNX1P0DP58 116 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 HOXA1P49639 335 aaPredicted RBP6.74□□□□□ -1.33
CHD4-208ENST00000540960 DYNLT3P51808 116 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 PAX9P55771 341 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 ERHP84090 104 aaKnown RBP6.74□□□□□ -1.33
CHD4-208ENST00000540960 NHLH2Q02577 135 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 PEA15Q15121 130 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 OXLD1Q5BKU9 147 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 CASC10Q5T4H9 136 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 ZNF841Q6ZN19 808 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 Q6ZRM9 215 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 BCL6BQ8N143 479 aaPredicted RBP6.74□□□□□ -1.33
CHD4-208ENST00000540960 OR11H6Q8NGC7 330 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 RPEQ96AT9 228 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 GPHA2Q96T91 129 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 SMIM3Q9BZL3 60 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 UQCC1Q9NVA1 299 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 DCAF16Q9NXF7 216 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 INSIG2Q9Y5U4 225 aa6.74□□□□□ -1.33
CHD4-208ENST00000540960 IGHV2-26A0A0B4J1V2 119 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 A8MXK9 166 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 H0YJW9 148 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 C3orf84H3BNL1 204 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 I3L521 148 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 UPK2O00526 184 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
CHD4-208ENST00000540960 CYB5BO43169 146 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 FBXO24O75426 580 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CST7O76096 145 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 ACTL6BO94805 426 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 IFNA10P01566 189 aa6.73□□□□□ -1.33
CHD4-208ENST00000540960 CT45A6P0DMU7 189 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms