RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC24A4Q8NFF2 622 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 BPIFCQ8NFQ6 507 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 TAF15Q92804 592 aaKnown RBP eCLIP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 HIPK2Q9H2X6 1198 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 UQCC1Q9NVA1 299 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 NAV3Q8IVL0 2385 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 C9JQL5 133 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 PRH1P02810 166 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 USF1P22415 310 aaPredicted RBP9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 NPY1RP25929 384 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 F2RL1P55085 397 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 BLOC1S1P78537 153 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 WT1-ASQ06250 92 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 ZNF726P1Q15940 193 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 SSX2Q16385 188 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 ACSM6Q6P461 480 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 SPSB3Q6PJ21 355 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 SCGB1C1Q8TD33 95 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 GNPNAT1Q96EK6 184 aaPredicted RBP9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 FAM210AQ96ND0 272 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 SCRT1Q9BWW7 348 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 FBXL15Q9H469 300 aa9.83□□□□□ -0.84
AP003559.1-201ENST00000540906 FCN1O00602 326 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 RNASE2P10153 161 aaKnown RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 FGF7P21781 194 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 LGALS7P47929 136 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 ELLP55199 621 aaPredicted RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 PRSS8Q16651 343 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 MLANAQ16655 118 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 ARSJQ5FYB0 599 aaPredicted RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 CLEC2AQ6UVW9 174 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 OR5B3Q8NH48 314 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 OR4A5Q8NH83 315 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 RPRMQ9NS64 109 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 SIGLEC9Q9Y336 463 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 FOXH1O75593 365 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 REG1AP05451 166 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 APELAP0DMC3 54 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 HABP2Q14520 560 aaPredicted RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 ATP6V1FQ16864 119 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 OR1L8Q8NGR8 309 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 PINX1Q96BK5 328 aaKnown RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 AIFM2Q9BRQ8 373 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 COMMD5Q9GZQ3 224 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 ENY2Q9NPA8 101 aa9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 POLR3KQ9Y2Y1 108 aaPredicted RBP9.82□□□□□ -0.84
AP003559.1-201ENST00000540906 CSMD1Q96PZ7 3565 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 CELSR2Q9HCU4 2923 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 IGHV3OR16-10A0A075B7F0 116 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 IFNA4P05014 189 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 SNRNP70P08621 437 aaKnown RBP9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 DEFA4P12838 97 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 PAX1P15863 534 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 RAB2AP61019 212 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 TEX45Q8NA69 505 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 VSTM2AQ8TAG5 236 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 PSMG3Q9BT73 122 aaPredicted RBP9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 NPCDR1Q9BY65 106 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 FKBP11Q9NYL4 201 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 METTL1Q9UBP6 276 aaKnown RBP9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
AP003559.1-201ENST00000540906 SMCO3A2RU48 225 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 RAB19A4D1S5 217 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 TRIM77I1YAP6 450 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 NDUFS8O00217 210 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 SCO1O75880 301 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 ADCYAP1P18509 176 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 ZP3P21754 424 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 CD1BP29016 333 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 RAB5CP51148 216 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 LGALS4P56470 323 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 PAX8Q06710 450 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 TNXAQ16473 311 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 FAM120AOSQ5T036 256 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 AKR1C8PQ5T2L2 129 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 RUSC1-AS1Q66K80 236 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 TREML4Q6UXN2 200 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 IL34Q6ZMJ4 242 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 CENPVQ7Z7K6 275 aaPredicted RBP9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 EAF1Q96JC9 268 aaPredicted RBP9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 PTPN13Q12923 2485 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 CENPEQ02224 2701 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 ZFHX3Q15911 3703 aa9.8□□□□□ -0.84
AP003559.1-201ENST00000540906 A0A096LNT2 108 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 CENPVL3A0A0U1RRI6 287 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 IGLC7A0M8Q6 106 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 AREGP15514 252 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 SNCAP37840 140 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 MFAP2P55001 183 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 GNB1P62873 340 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 DLK1P80370 383 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 GCSAMLQ5JQS6 135 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 MGST2Q99735 147 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 SOX21Q9Y651 276 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms