RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 IGHV3-7P01780 117 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 HSPB1P04792 205 aaKnown RBP6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 OPRK1P41145 380 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LINC00205P59089 165 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 RPS16P62249 146 aaKnown RBP6.72□□□□□ -1.33
C2CD3-215ENST00000540452 SSX2Q16385 188 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 TUSC1Q2TAM9 212 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
C2CD3-215ENST00000540452 KHDC3LQ587J8 217 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 UTF1Q5T230 341 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 AVPI1Q5T686 147 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 TPTE2P1Q5T6R2 138 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 PVRIGQ6DKI7 326 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 OR8G2PQ6IF36 304 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 SSX9Q7RTT3 188 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 PNKDQ8N490 385 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 Q8N7P7 452 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 BPIFCQ8NFQ6 507 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 P2RX4Q99571 388 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 NPCDR1Q9BY65 106 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
C2CD3-215ENST00000540452 INSIG2Q9Y5U4 225 aa6.72□□□□□ -1.33
C2CD3-215ENST00000540452 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 TEX50A0A1B0GTY4 177 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 UBE2L5PA0A1B0GUS4 154 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 A0A1W2PPI3 338 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 SRRM4A7MD48 611 aaKnown RBP6.71□□□□□ -1.34
C2CD3-215ENST00000540452 SEC14L6B5MCN3 397 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 FAM157AC9JC47 383 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 C19orf84I3L1E1 186 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 CYB5BO43169 146 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 CRYGBP07316 175 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 FGF7P21781 194 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 RPL29P47914 159 aaKnown RBP6.71□□□□□ -1.34
C2CD3-215ENST00000540452 RUNX1Q01196 453 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 EBI3Q14213 229 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 GUK1Q16774 197 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 RBMS3Q6XE24 437 aaKnown RBP6.71□□□□□ -1.34
C2CD3-215ENST00000540452 TMEM144Q7Z5S9 345 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 OR1L6Q8NGR2 347 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 PIMREGQ9BSJ6 248 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 SCRT1Q9BWW7 348 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 SLC35B3Q9H1N7 401 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 LPAR2Q9HBW0 351 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 RPRMQ9NS64 109 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 ONECUT1Q9UBC0 465 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 ARL2-SNX15V9GYD0 113 aa6.71□□□□□ -1.34
C2CD3-215ENST00000540452 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
C2CD3-215ENST00000540452 TRAV3A0A0B4J244 114 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 F8W036 122 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 NDUFA3O95167 84 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 CA2P00918 260 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 IFNA4P05014 189 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 CDKN1AP38936 164 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 PSMB3P49720 205 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 UBE2E1P51965 193 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 LMO4P61968 165 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 PRSS8Q16651 343 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 ETFRF1Q6IPR1 90 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 SPSB3Q6PJ21 355 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 TREML4Q6UXN2 200 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 VKORC1L1Q8N0U8 176 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 NPBQ8NG41 125 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 TMEM190Q8WZ59 177 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
C2CD3-215ENST00000540452 NARS2Q96I59 477 aaKnown RBP6.7□□□□□ -1.34
C2CD3-215ENST00000540452 SLC35E1Q96K37 410 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 RNF2Q99496 336 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 CCL19Q99731 98 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 RSG1Q9BU20 258 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 ACTR3CQ9C0K3 210 aaPredicted RBP6.7□□□□□ -1.34
C2CD3-215ENST00000540452 SIRPDQ9H106 197 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 ZNF430Q9H8G1 570 aaPredicted RBP6.7□□□□□ -1.34
C2CD3-215ENST00000540452 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 SIGLEC9Q9Y336 463 aa6.7□□□□□ -1.34
C2CD3-215ENST00000540452 SMCO3A2RU48 225 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 RBFOX3A6NFN3 312 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 VWC2LB2RUY7 222 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 RRHO14718 337 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 ACTL6BO94805 426 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 VENTXO95231 258 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 APOC3P02656 99 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 SNRNP70P08621 437 aaKnown RBP6.69□□□□□ -1.34
C2CD3-215ENST00000540452 RNASE2P10153 161 aaKnown RBP6.69□□□□□ -1.34
C2CD3-215ENST00000540452 GATA3P23771 443 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 PAX6P26367 422 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 FHITP49789 147 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 SELENOTP62341 195 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 PSG5Q15238 335 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 CLEC2AQ6UVW9 174 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 PPP1R27Q86WC6 154 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 CLDND2Q8NHS1 167 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 NANPQ8TBE9 248 aa6.69□□□□□ -1.34
C2CD3-215ENST00000540452 SFT2D1Q8WV19 159 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms