RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 WISP2O76076 250 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 CXCL1P09341 107 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 GNB2P62879 340 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 TMEM42Q69YG0 159 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 MMD2Q8IY49 270 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 OR8A1Q8NGG7 326 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 ITLN1Q8WWA0 313 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 SPSB4Q96A44 273 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 PSMG3Q9BT73 122 aaPredicted RBP8.39□□□□□ -1.07
TRAF1-202ENST00000540010 TCF19Q9Y242 345 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 KIAA1549Q9HCM3 1950 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 MPDU1O75352 247 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 CELA3BP08861 270 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
TRAF1-202ENST00000540010 COX19Q49B96 90 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 SPATA45Q537H7 98 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 Q6ZT83 130 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 CYYR1Q96J86 154 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 SLX1AQ9BQ83 275 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 PKIBQ9C010 78 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 AHRRA9YTQ3 701 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 CD99P14209 185 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 LRRC75BQ2VPJ9 315 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 KRTCAP3Q53RY4 240 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 OR5P3Q8WZ94 311 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 SFRP2Q96HF1 295 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 OPN3Q9H1Y3 402 aaPredicted RBP8.39□□□□□ -1.07
TRAF1-202ENST00000540010 VSIRQ9H7M9 311 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 INSIG2Q9Y5U4 225 aa8.39□□□□□ -1.07
TRAF1-202ENST00000540010 TRBV6-7A0A0A0MS04 114 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 KRTAP27-1Q3LI81 207 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 RPL39P5Q59GN2 51 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 IGFL2Q6UWQ7 119 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 COLCA1Q6ZS62 124 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 WBP1Q96G27 269 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 NPCDR1Q9BY65 106 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 PGPA6NDG6 321 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 CEACAM18A8MTB9 384 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 UBE2CO00762 179 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 TFF1P04155 84 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 CTAG1AP78358 180 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 Q6ZSR3 168 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 WNT10AQ9GZT5 417 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 GABRA6Q16445 453 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 ACSF3Q4G176 576 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 HEPN1Q6WQI6 88 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 ZNF525Q8N782 197 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 COL25A1Q9BXS0 654 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 J3KRW8 73 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 PPIHO43447 177 aaKnown RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
TRAF1-202ENST00000540010 ID3Q02535 119 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 HERPUD1Q15011 391 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 FAM201AQ5SY85 155 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 TCF23Q7RTU1 214 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 SAXO1Q8IYX7 474 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 OR8G5Q8NG78 346 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 PLSCR2Q9NRY7 297 aa8.38□□□□□ -1.07
TRAF1-202ENST00000540010 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 ISLRO14498 428 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 GNG7O60262 68 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
TRAF1-202ENST00000540010 FOXF2Q12947 444 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 PRNTQ86SH4 94 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 KIR2DL2P43627 348 aaPredicted RBP8.37□□□□□ -1.07
TRAF1-202ENST00000540010 NABP2Q9BQ15 211 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 TMEM56-RWDD3S4R434 201 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 NAPSAO96009 420 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 ORM1P02763 201 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 REG1AP05451 166 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 MPZP25189 248 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 PPOXP50336 477 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 RND2P52198 227 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 GATAD1Q8WUU5 269 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 RASL11BQ9BPW5 248 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
TRAF1-202ENST00000540010 FAM90A27PA6NNH2 459 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 J3QR89 54 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 CGAP01215 116 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 C1QTNF9P0C862 333 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 STPG3Q8N7X2 389 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 IFITM10A6NMD0 228 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 MT-ND6P03923 174 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 RELBQ01201 579 aa8.36□□□□□ -1.07
TRAF1-202ENST00000540010 COTL1Q14019 142 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms