RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 YPEL2Q96QA6 119 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 IL36BQ9NZH7 164 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 SOX21Q9Y651 276 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 RTTNQ86VV8 2226 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 H0YL77 283 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 IL6RP08887 468 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 SRIP30626 198 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ICAM4Q14773 271 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ZXDCQ2QGD7 858 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ARPC1AQ92747 370 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 KIAA2026Q5HYC2 2103 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 TGIF2-C20orf24A0A0A6YYL0 155 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 C17orf100A8MU93 164 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LCN2P80188 198 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ZIC4Q8N9L1 334 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ALKBH7Q9BT30 221 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 IGFBP3P17936 291 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LHX2P50458 406 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 C19orf48Q6RUI8 117 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 PPP1R27Q86WC6 154 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 TEX45Q8NA69 505 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 OR4D5Q8NGN0 318 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LRRK1Q38SD2 2015 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LOC102723996A0A087X1L8 192 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 A0A1B0GW15 77 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 IGKV1D-33P01593 117 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 IGKV1-33P01594 117 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 SNRPCP09234 159 aaKnown RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 PAX1P15863 534 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 Q6AWC8 147 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 MRPL14Q6P1L8 145 aaKnown RBP5.48□□□□□ -1.53
LSAMP-207ENST00000539563 OR10S1Q8NGN2 331 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 NPCDR1Q9BY65 106 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 TBR1Q16650 682 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 CYB5R2Q6BCY4 276 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 RLFQ13129 1914 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 A0A0G2JK05 382 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF98A6NK75 572 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 ATP5LO75964 103 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 FAM27E3Q08E93 113 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 PSG7Q13046 419 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 SLC25A34Q6PIV7 304 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 IGLV3-32A0A0A0MS00 114 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 RPL39P5Q59GN2 51 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF506Q5JVG8 444 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 FAM131CQ96AQ9 280 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 TUBA4BQ9H853 241 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 ALPK2Q86TB3 2170 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 TRBV20OR9-2A0A075B6H5 130 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 PRSS2P07478 247 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 LINC00271P0C7V0 271 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 PEX7O00628 323 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 EFEMP2O95967 443 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 MDKP21741 143 aaPredicted RBP5.47□□□□□ -1.53
LSAMP-207ENST00000539563 C1QL2Q7Z5L3 287 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 LRTM2Q8N967 370 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 FOXI3A8MTJ6 420 aaPredicted RBP5.47□□□□□ -1.53
LSAMP-207ENST00000539563 TAS2R60P59551 318 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 HIST1H1AQ02539 215 aaPredicted RBP5.47□□□□□ -1.53
LSAMP-207ENST00000539563 CD69Q07108 199 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 C12orf77C9JDV5 145 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 WDR82Q6UXN9 313 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 FBXL7Q9UJT9 491 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 TNFRSF18Q9Y5U5 241 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 C7orf71A4D174 169 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 H7C2G1 150 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 RAMP1O60894 148 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 NPIPB7O75200 414 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 MOSP00540 346 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 UMODP07911 640 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 CDX1P47902 265 aaPredicted RBP5.47□□□□□ -1.53
LSAMP-207ENST00000539563 PLP1P60201 277 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 OR11H4Q8NGC9 324 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 RPRMQ9NS64 109 aa5.47□□□□□ -1.53
LSAMP-207ENST00000539563 CEACAM4O75871 244 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 ASIPP42127 132 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 PLAURQ03405 335 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 SRSF7Q16629 238 aaKnown RBP eCLIP5.46□□□□□ -1.53
LSAMP-207ENST00000539563 FBXL15Q9H469 300 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 DOCK8Q8NF50 2099 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF497Q6ZNH5 498 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 MRAP2Q96G30 205 aa5.46□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF385CQ66K41 422 aaPredicted RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 OR4X2Q8NGF9 303 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 RTBDNQ9BSG5 229 aaPredicted RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 CBLN4Q9NTU7 201 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 C21orf62Q9NYP8 219 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 FOXA2Q9Y261 457 aaPredicted RBP5.46□□□□□ -1.54
LSAMP-207ENST00000539563 DOCK11Q5JSL3 2073 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 MPTX1A8MV57 137 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 CELA3AP09093 270 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 LAIR2Q6ISS4 152 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 BIVMQ86UB2 503 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM190Q8WZ59 177 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 C18orf12Q96KH6 178 aa5.46□□□□□ -1.54
LSAMP-207ENST00000539563 SDF2L1Q9HCN8 221 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms