RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ABHD12Q8N2K0 398 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 GP6Q9HCN6 339 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 TMEM167BQ9NRX6 74 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 SLC25A10Q9UBX3 287 aaPredicted RBP15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 PSG11Q9UQ72 335 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 HCFC1P51610 2035 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 PINLYPA6NC86 204 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 LINC00869P0C866 280 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 FOXF2Q12947 444 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 TBR1Q16650 682 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 ZNF766Q5HY98 468 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 IBA57Q5T440 356 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 ETFRF1Q6IPR1 90 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 DMXL1Q9Y485 3027 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 FAM181BA6NEQ2 426 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 IGLL1P15814 213 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 SLC24A4Q8NFF2 622 aa15.36■□□□□ 0.05
SFSWAP-207ENST00000538548 IZUMO1RA6ND01 250 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 FCGR3BO75015 233 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 HSBP1O75506 76 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 USF1P22415 310 aaPredicted RBP15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 GABRA2P47869 451 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 SLAQ13239 276 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 OR8B3Q8NGG8 313 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 COQ2Q96H96 371 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 LOXL4Q96JB6 756 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 OR8B2Q96RD0 313 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 ZNF331Q9NQX6 463 aaPredicted RBP15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 PTPRBP23467 1997 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 DUTP33316 252 aaKnown RBP15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 FOLR3P41439 243 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 PLGLB1Q02325 96 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 PSG5Q15238 335 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 VAMP3Q15836 100 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 DOCK7Q96N67 2140 aa15.35■□□□□ 0.05
SFSWAP-207ENST00000538548 IGHV3-43A0A0B4J1X8 118 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 IGHV3-64DA0A0J9YX35 117 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 CFIP05156 583 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 IGHV3-43DP0DP04 118 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 COL8A2P25067 703 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 SSTR5P35346 364 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 RPS20P60866 119 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 PRR20EP86478 221 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 PRR20CP86479 221 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 PRR20DP86480 221 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 PRR20BP86481 221 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 PRR20AP86496 221 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 TNXAQ16473 311 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 Q56UQ5 140 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 LRRC10Q5BKY1 277 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 RASL11AQ6T310 242 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 MIR17HGQ75NE6 70 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 WIPF2Q8TF74 440 aaPredicted RBP15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 RHOGP84095 191 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 EBLN2Q6P2I7 272 aa15.34■□□□□ 0.05
SFSWAP-207ENST00000538548 TRGV8A0A0C4DH27 118 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 DEFB108AA8MXU0 73 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 IGLV2-8P01709 118 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 SP1P08047 785 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 ERVK-16P61578 105 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 UBE2G1P62253 170 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 ARG2P78540 354 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 RELBQ01201 579 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 Q8TCH9 128 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 SERTAD4Q9NUC0 356 aa15.33■□□□□ 0.05
SFSWAP-207ENST00000538548 ZNF891A8MT65 544 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-207ENST00000538548 M0R2Z0 102 aa15.33■□□□□ 0.04
SFSWAP-207ENST00000538548 GRPP07492 148 aa15.33■□□□□ 0.04
SFSWAP-207ENST00000538548 SMIM15Q7Z3B0 74 aa15.33■□□□□ 0.04
SFSWAP-207ENST00000538548 SPACA3Q8IXA5 215 aa15.33■□□□□ 0.04
SFSWAP-207ENST00000538548 TET2Q6N021 2002 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 GPR12P47775 334 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 CYB561P49447 251 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 PPOXP50336 477 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 Q0VFX4 171 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 LYSMD4Q5XG99 296 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 COMMD5Q9GZQ3 224 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 TECRQ9NZ01 308 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 BOKQ9UMX3 212 aaPredicted RBP15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 TCF19Q9Y242 345 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 J3QW42 95 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 ACTL6BO94805 426 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 IGF2BP2-AS1Q96M15 143 aa15.32■□□□□ 0.04
SFSWAP-207ENST00000538548 C2orf70A6NJV1 201 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 PROP1O75360 226 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 MGST1P10620 155 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 KLF5Q13887 457 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 GABRA6Q16445 453 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 Q6ZR03 302 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 MDP1Q86V88 176 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 VKORC1L1Q8N0U8 176 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 OR13A1Q8NGR1 328 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 RFESDQ8TAC1 157 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 CORO2AQ92828 525 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 SAP30LQ9HAJ7 183 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 LOC400499M0QZD8 3231 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 CFAP47Q6ZTR5 3102 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 M0QZ24 198 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 LAMA5O15230 3695 aa15.31■□□□□ 0.04
SFSWAP-207ENST00000538548 TRAV3A0A0B4J244 114 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms