RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 I3L521 148 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 TRBV12-3P01733 135 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 IGHV3-11P01762 117 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 SERPINE2P07093 398 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 CTRB1P17538 263 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 ASAH1Q13510 395 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 CTRB2Q6GPI1 263 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 LYZL2Q7Z4W2 148 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 SLC25A42Q86VD7 318 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 FAM219AQ8IW50 185 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 OR52B4Q8NGK2 314 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 SLC25A21Q9BQT8 299 aaPredicted RBP10.13□□□□□ -0.79
CHFR-216ENST00000538235 C7orf50Q9BRJ6 194 aaKnown RBP10.13□□□□□ -0.79
CHFR-216ENST00000538235 C20orf85Q9H1P6 137 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 NDUFA4L2Q9NRX3 87 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 FBN3Q75N90 2809 aa10.13□□□□□ -0.79
CHFR-216ENST00000538235 TRBV9A0A0B4J1U6 114 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 SPNP16150 400 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 MAS1LP35410 378 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 INPP1P49441 399 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 TPPP2P59282 170 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 UBE2MP61081 183 aaKnown RBP10.12□□□□□ -0.79
CHFR-216ENST00000538235 ERVK-16P61578 105 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 C2orf68Q2NKX9 166 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 CXorf66Q5JRM2 361 aaPredicted RBP10.12□□□□□ -0.79
CHFR-216ENST00000538235 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 OR5M8Q8NGP6 311 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 RBPMSQ93062 196 aaKnown RBP10.12□□□□□ -0.79
CHFR-216ENST00000538235 ZNF414Q96IQ9 312 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 P2RX4Q99571 388 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 PHB2Q99623 299 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 OR51B2Q9Y5P1 312 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 S4R3C0 116 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
CHFR-216ENST00000538235 TRAV6A0A075B6T7 132 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 NPIPB5A8MRT5 1133 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 M0QZ24 198 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 ST8SIA3O43173 380 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 NXPH3O95157 252 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 SFT2D2O95562 160 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 TRGV3P03979 118 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 TCRBP04435 133 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 CRYGCP07315 174 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 FGF2P09038 288 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 PSMB6P28072 239 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 S100GP29377 79 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
CHFR-216ENST00000538235 AKR1C2P52895 323 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 FHL3Q13643 280 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 AARDQ4LEZ3 155 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 H2BFWTQ7Z2G1 175 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 ZNF695Q8IW36 515 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 SGPP2Q8IWX5 399 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 C4orf3Q8WVX3 66 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 COA4Q9NYJ1 87 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 CACNG5Q9UF02 275 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
CHFR-216ENST00000538235 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 A0A087WW49 117 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 C9orf170A2RU37 121 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
CHFR-216ENST00000538235 OR2J3O76001 311 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 NDUFB8O95169 186 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 BRI3O95415 125 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 VAMP1P23763 118 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 TMEM267Q0VDI3 215 aaPredicted RBP10.1□□□□□ -0.79
CHFR-216ENST00000538235 DHRS2Q13268 280 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
CHFR-216ENST00000538235 UBE2E2Q96LR5 201 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 SPIN2AQ99865 258 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 SPIN2BQ9BPZ2 258 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 SEC22CQ9BRL7 303 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 GON7Q9BXV9 100 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
CHFR-216ENST00000538235 MFSD2BA6NFX1 497 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 NUDT19A8MXV4 375 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 ADAP1O75689 374 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 ACTL6BO94805 426 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
CHFR-216ENST00000538235 OR4E1P0C645 316 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 RAB25P57735 213 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 RHOGP84095 191 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 PRCDQ00LT1 54 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 ZNF429Q86V71 674 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 OR1L8Q8NGR8 309 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 TMEM170AQ8WVE7 144 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 CCDC140Q96MF4 163 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms