RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 RAB4BP61018 213 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 RPL8P62917 257 aaKnown RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 ERHP84090 104 aaKnown RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 HABP2Q14520 560 aaPredicted RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 WDR25Q64LD2 544 aaPredicted RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 TGIF2LYQ8IUE0 185 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 TGIF2LXQ8IUE1 241 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 MUC15Q8N387 334 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 PNKDQ8N490 385 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 CACNG8Q8WXS5 425 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 NEUROG1Q92886 237 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 ISOC2Q96AB3 205 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 TMEM68Q96MH6 324 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 YPEL4Q96NS1 127 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 RNF2Q99496 336 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 MGST2Q99735 147 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 SSX3Q99909 188 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 MRPL20Q9BYC9 149 aaKnown RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 LSM4Q9Y4Z0 139 aaKnown RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 APC2O95996 2303 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 RP1L1Q8IWN7 2480 aaPredicted RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 TRAV3A0A0B4J244 114 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 C11orf94C9JXX5 98 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 DLL1O00548 723 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 CCL21O00585 134 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 UBE2CO00762 179 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 PPP1R2P9O14990 202 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 MMP23AO75900 390 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 CA2P00918 260 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 FBP1P09467 338 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 SMIM6P0DI80 62 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 IGHV1-8P0DP01 117 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 CD99P14209 185 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 CCL3L1P16619 93 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 GPX4P36969 197 aaPredicted RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 LGALS7P47929 136 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 AKR1D1P51857 326 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 PRRX1P54821 245 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 DLX6P56179 175 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 TAS2R45P59539 299 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 ELOBQ15370 118 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 ADIRFQ15847 76 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 HLA-DRB5Q30154 266 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 BSXQ3C1V8 233 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 ZNF672Q499Z4 452 aaPredicted RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 C1orf229Q6ZS94 237 aaPredicted RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 TMEM144Q7Z5S9 345 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 ABHD12Q8N2K0 398 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 Q8N7P7 452 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 OR4F5Q8NH21 305 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 RNASEH2CQ8TDP1 164 aaKnown RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 OR5B12Q96R08 314 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 OR4F4Q96R69 305 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 NABP2Q9BQ15 211 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 HINT2Q9BX68 163 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 RAB1BQ9H0U4 201 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 TMEM133Q9H2Q1 129 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 PARLQ9H300 379 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 TMEM167BQ9NRX6 74 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 METTL1Q9UBP6 276 aaKnown RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 CTSZQ9UBR2 303 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 MIOXQ9UGB7 285 aa5.41□□□□□ -1.54
USP28-206ENST00000538224 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
USP28-206ENST00000538224 CEP295Q9C0D2 2601 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 TRBV24-1A0A075B6N3 115 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 TEX50A0A1B0GTY4 177 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 H7BYZ3 331 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 AP4M1O00189 453 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 ATXN7O15265 892 aaPredicted RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 PAGE4O60829 102 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 IGHV2-70P01814 119 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 IGKV1-16P04430 117 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 S100A9P06702 114 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 RPS10P46783 165 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 ERVFRD-1P60508 538 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 RPS16P62249 146 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 ARSJQ5FYB0 599 aaPredicted RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 ETFRF1Q6IPR1 90 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 KCNIP4Q6PIL6 250 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 SPNS3Q6ZMD2 512 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 ZFP82Q8N141 532 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 ZCCHC24Q8N2G6 241 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 STPG3Q8N7X2 389 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 TEX45Q8NA69 505 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 BEND2Q8NDZ0 799 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 OR8B3Q8NGG8 313 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 C8orf46Q8TAG6 207 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 C2CD4CQ8TF44 421 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 Q8WTZ3 238 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 TMEM170AQ8WVE7 144 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 NEU4Q8WWR8 484 aaPredicted RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 C22orf15Q8WYQ4 148 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 ST6GALNAC6Q969X2 333 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 RPUSD4Q96CM3 377 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 TIMD4Q96H15 378 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 UHRF2Q96PU4 802 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms