RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 NEUROG1Q92886 237 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 LSM4Q9Y4Z0 139 aaKnown RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 TANC2Q9HCD6 1990 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 A0A1B0GV90 55 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 IGKV1D-33P01593 117 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 IGKV1-33P01594 117 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 RNF224P0DH78 156 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 LGALS7P47929 136 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 ERHP84090 104 aaKnown RBP11.07□□□□□ -0.64
SMG6-203ENST00000536871 AKIRIN2Q53H80 203 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 UTF1Q5T230 341 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 TGIF2LXQ8IUE1 241 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 ABHD12Q8N2K0 398 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 TMEM167AQ8TBQ9 72 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 TIMD4Q96H15 378 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 NABP2Q9BQ15 211 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 MRPL20Q9BYC9 149 aaKnown RBP11.07□□□□□ -0.64
SMG6-203ENST00000536871 TMEM133Q9H2Q1 129 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 CBY1Q9Y3M2 126 aa11.07□□□□□ -0.64
SMG6-203ENST00000536871 DSCAML1Q8TD84 2053 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 DDTP30046 118 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 C8orf46Q8TAG6 207 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 C19orf24Q9BVV8 132 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 CBLN4Q9NTU7 201 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 AMMECR1Q9Y4X0 333 aaPredicted RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 RAI1Q7Z5J4 1906 aaPredicted RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 OR2C1O95371 312 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 MT-CO2P00403 227 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 CA2P00918 260 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 CEBPGP53567 150 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG6-203ENST00000536871 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
SMG6-203ENST00000536871 BSXQ3C1V8 233 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 Q8N7P7 452 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 OR8B3Q8NGG8 313 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 OR5R1Q8NH85 324 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 OR8B2Q96RD0 313 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
SMG6-203ENST00000536871 TEX50A0A1B0GTY4 177 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 TGOLN2O43493 480 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 FCN3O75636 299 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 BEND2Q8NDZ0 799 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 C20orf24Q9BUV8 137 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 PRORYQ9H606 182 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 NAT8Q9UHE5 227 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 PXMP4Q9Y6I8 212 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 AKAP13Q12802 2813 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 FRYQ5TBA9 3013 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 PLCE1Q9P212 2302 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 PTPRQQ9UMZ3 2332 aa11.05□□□□□ -0.64
SMG6-203ENST00000536871 PDE6DO43924 150 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 PLAUP00749 431 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
SMG6-203ENST00000536871 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 SLC35E1Q96K37 410 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 YPEL4Q96NS1 127 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 MGST2Q99735 147 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 ANKRD11Q6UB99 2663 aaPredicted RBP11.04□□□□□ -0.64
SMG6-203ENST00000536871 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
SMG6-203ENST00000536871 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 CXorf1O96002 111 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 RHOBP62745 196 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 CYP2G1PQ6ZSU1 146 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
SMG6-203ENST00000536871 RNF5Q99942 180 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
SMG6-203ENST00000536871 F6UZH7 168 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 DLL1O00548 723 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 ERVFRD-1P60508 538 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 HLA-DRB5Q30154 266 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 PNKDQ8N490 385 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
SMG6-203ENST00000536871 CLEC7AQ9BXN2 247 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
SMG6-203ENST00000536871 SIAH2O43255 324 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 VENTXO95231 258 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 STAG3L2P0CL84 134 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms