RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TAF1LQ8IZX4 1826 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 VEGFBP49765 207 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 TUSC5Q8IXB3 177 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 PRELID3AQ96N28 172 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 LIME1Q9H400 295 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 SHISA7A6NL88 538 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 K7EP34 96 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 CA1P00915 261 aaPredicted RBP3.38□□□□□ -1.87
SOX6-217ENST00000533870 ADMP35318 185 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 SPATA46Q5T0L3 261 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 MYOZ3Q8TDC0 251 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 TRGV9Q99603 122 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 RPH3ALQ9UNE2 315 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 ZNF256Q9Y2P7 627 aaPredicted RBP3.38□□□□□ -1.87
SOX6-217ENST00000533870 DOCK1Q14185 1865 aa3.38□□□□□ -1.87
SOX6-217ENST00000533870 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 TCRBV4S1A1TA0A5B7 111 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MED19A0JLT2 244 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 F2Z2F3 143 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 COX6A1P12074 109 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ACP1P24666 158 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 KLF17Q5JT82 389 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 ACP7Q6ZNF0 438 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 TMEM256Q8N2U0 113 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 RTN4RQ9BZR6 473 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 LSM4Q9Y4Z0 139 aaKnown RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 CHD4Q14839 1912 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 C15orf62A8K5M9 175 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 C17orf98A8MV24 154 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 IL4P05112 153 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ZFP36L1Q07352 338 aaKnown RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 UBALD1Q8TB05 177 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 HIF1ANQ9NWT6 349 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 R4GN57 208 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 LOC102724200A0A096LPH7 203 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 IGLC7A0M8Q6 106 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 LINC00311Q8N616 119 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 PIFOQ8TCI5 191 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 RPEQ96AT9 228 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ATP6V0BQ99437 205 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 SEPSECSQ9HD40 501 aaKnown RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 FBXL7Q9UJT9 491 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ITGB4P16144 1822 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MESP2Q0VG99 397 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MORN3Q6PF18 240 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 PPP1R32Q7Z5V6 425 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MUC15Q8N387 334 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 ZNF775Q96BV0 537 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 AURKAIP1Q9NWT8 199 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 LILRA1O75019 489 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 SELLP14151 372 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 GATA4P43694 442 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 SLC35B1P78383 322 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 C21orf62-AS1Q17RA5 79 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MPV17L2Q567V2 206 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 METRNQ9UJH8 293 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MYO18AQ92614 2054 aaKnown RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 A0A096LPE4 126 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 A0A1W2PPZ6 126 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 F8W1H4 67 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 M0QZ24 198 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 P0C879 139 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 COX8AP10176 69 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 EDN3P14138 238 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 TNFAIP6P98066 277 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 SP5Q6BEB4 398 aaPredicted RBP3.37□□□□□ -1.87
SOX6-217ENST00000533870 MDP1Q86V88 176 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 SLC22A18ASQ8N1D0 253 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 V9GYV3 84 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 MYH13Q9UKX3 1938 aa3.37□□□□□ -1.87
SOX6-217ENST00000533870 A0A0G2JMM0 328 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 A0A1W2PPB8 328 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 KIR3DP1A8MWS1 328 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 GNG7O60262 68 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 MT-CO3P00414 261 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 GFRA1P56159 465 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PRSS8Q16651 343 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 KRTAP27-1Q3LI81 207 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 C3orf36Q3SXR2 165 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PMS2CLQ68D20 193 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 UNQ5815/PRO19632Q6UWF5 114 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SCGB1D4Q6XE38 83 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 Q6ZS92 163 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 Q6ZWC4 215 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SPACA3Q8IXA5 215 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 DEPPQ9NTK1 212 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SLX4Q8IY92 1834 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 OTOL1A6NHN0 477 aaPredicted RBP3.36□□□□□ -1.87
SOX6-217ENST00000533870 SMAD7O15105 426 aaKnown RBP3.36□□□□□ -1.87
SOX6-217ENST00000533870 GHRHP01286 108 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 ZNF726P1Q15940 193 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 ALKBH2Q6NS38 261 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 NEGR1Q7Z3B1 354 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms