RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 OR8H3Q8N146 312 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 KLHL30-AS1Q8NEE0 82 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 OR2T35Q8NGX2 323 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 FLYWCH2Q96CP2 140 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 SPIN2AQ99865 258 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 SPIN2BQ9BPZ2 258 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 NMES1Q9C002 83 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 COMMD9Q9P000 198 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 WASHC3Q9Y3C0 194 aa8.84□□□□□ -0.99
TRAPPC4-213ENST00000533149 A0A1B0GU03 582 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 SRRM4A7MD48 611 aaKnown RBP8.83□□□□□ -1
TRAPPC4-213ENST00000533149 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 IGKV1-16P04430 117 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 HNRNPCP07910 306 aaKnown RBP eCLIP8.83□□□□□ -1
TRAPPC4-213ENST00000533149 P0C879 139 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 ERVK-16P61578 105 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 THOC7Q6I9Y2 204 aaKnown RBP8.83□□□□□ -1
TRAPPC4-213ENST00000533149 CCDC144NLQ6NUI1 221 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 SSX9Q7RTT3 188 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 H2BFWTQ7Z2G1 175 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 PDPNQ86YL7 162 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 FAM219AQ8IW50 185 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 DMBX1Q8NFW5 382 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 PPP1R1CQ8WVI7 109 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 RITA1Q96K30 269 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 LYSTQ99698 3801 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 HYDINQ4G0P3 5121 aa8.83□□□□□ -1
TRAPPC4-213ENST00000533149 TRAV14DV4A0A0A6YYC5 116 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 MARCH11A6NNE9 402 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 SEC14L6B5MCN3 397 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 G3V3Q6 166 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 M0QZK8 103 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 CCL24O00175 119 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 SHOXO15266 292 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 C1QBP02746 253 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 SLC25A6P12236 298 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 PSMB6P28072 239 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 CD1BP29016 333 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 SMCO1Q147U7 214 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 ZFP69Q49AA0 526 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 CXorf66Q5JRM2 361 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-213ENST00000533149 ZNF329Q86UD4 541 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 OR4D5Q8NGN0 318 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 OR1S1Q8NH92 325 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 OSR1Q8TAX0 266 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-213ENST00000533149 RHOVQ96L33 236 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 AIFM2Q9BRQ8 373 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 EDA2RQ9HAV5 297 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 CACNG5Q9UF02 275 aa8.82□□□□□ -1
TRAPPC4-213ENST00000533149 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 PITX3O75364 302 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 OR2F2O95006 317 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 MPC2O95563 127 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 LY86O95711 162 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 MBPP02686 304 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-213ENST00000533149 IL6RP08887 468 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-213ENST00000533149 OR9G9P0C7N8 305 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 BRS3P32247 399 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 LGALS7P47929 136 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 ARHGDIBP52566 201 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 RAB32Q13637 225 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 HNF4GQ14541 408 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 POU2AF1Q16633 256 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 LRRC37A5PQ49AS3 106 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 C9orf152Q5JTZ5 239 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 C18orf65Q6ZTR6 163 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 NOXA1Q86UR1 476 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 COMMD1Q8N668 190 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 OR11H4Q8NGC9 324 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 RAX2Q96IS3 184 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 HARBI1Q96MB7 349 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 RBM14Q96PK6 669 aaKnown RBP8.81□□□□□ -1
TRAPPC4-213ENST00000533149 RNF5Q99942 180 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 RNF126Q9BV68 326 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-213ENST00000533149 TMEM140Q9NV12 185 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 NSG2Q9Y328 171 aa8.81□□□□□ -1
TRAPPC4-213ENST00000533149 FAM90A9PA6NNJ1 464 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 H0YIZ8 118 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 UPK2O00526 184 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 SCGB1D2O95969 90 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 IGLV2-23P01705 113 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 SLC25A4P12235 298 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 CD24P25063 80 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 EIF2B2P49770 351 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 ID3Q02535 119 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 FGL1Q08830 312 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 OR4A47Q6IF82 309 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 FOXRED2Q8IWF2 684 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 PUSL1Q8N0Z8 303 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 OR4A16Q8NH70 328 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 DUX3Q96PT4 197 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 LSM5Q9Y4Y9 91 aaKnown RBP8.8□□□□□ -1
TRAPPC4-213ENST00000533149 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 K7EPK0 472 aa8.8□□□□□ -1
TRAPPC4-213ENST00000533149 ST8SIA3O43173 380 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms