RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 YTHDC2Q9H6S0 1430 aaKnown RBP1.35□□□□□ -2.19
CD44-234ENST00000531873 MUC21A0A0G2JKD1 596 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 IGHV1-69-2A0A0G2JMI3 117 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 MUC21A0A140T8X8 626 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 A0A1W2PQD3 144 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 TMEM210A6NLX4 147 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 CLDN24A6NM45 220 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 GOLGA6L19H0YKK7 550 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 UBFD1O14562 309 aaKnown RBP1.35□□□□□ -2.19
CD44-234ENST00000531873 GNRH2O43555 120 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 TRAPPC3O43617 180 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 CHP2O43745 196 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 CD24P25063 80 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 GZMMP51124 257 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 AP3S2P59780 193 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 ERVS71-1P61550 626 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 FABP9Q0Z7S8 132 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 HES1Q14469 280 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 SS18Q15532 418 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 ACOT6Q3I5F7 207 aaPredicted RBP1.35□□□□□ -2.19
CD44-234ENST00000531873 CLDN22Q8N7P3 220 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 OR1L8Q8NGR8 309 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 FGF13Q92913 245 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 PPP1R2P1Q96PQ5 205 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 LRRC19Q9H756 370 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 TUBA4BQ9H853 241 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 CMTM6Q9NX76 183 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 AK3Q9UIJ7 227 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 PRELID1Q9Y255 219 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 ANGPT4Q9Y264 503 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 DOPEY1Q5JWR5 2465 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 ADAMTS7Q9UKP4 1686 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 ZFHX2Q9C0A1 2572 aaPredicted RBP1.35□□□□□ -2.19
CD44-234ENST00000531873 ABCC1P33527 1531 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 KCPQ6ZWJ8 1503 aa1.35□□□□□ -2.19
CD44-234ENST00000531873 DCCP43146 1447 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 VCANP13611 3396 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 HIVEP2P31629 2446 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 BPTFQ12830 3046 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 A0A087WUJ7 227 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 A0A1B0GW54 56 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 TMEM235A6NFC5 223 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 SMIM9A6NGZ8 99 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 TMEM114B3SHH9 223 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 NSA2O95478 260 aaKnown RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 CCL5P13501 91 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 CBR1P16152 277 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 GZMHP20718 246 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 SLCO1A2P46721 670 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 RPL27AP46776 148 aaKnown RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 OMPP47874 163 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 IDH3GP51553 393 aaPredicted RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 RPL30P62888 115 aaKnown RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 CCL7P80098 99 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 GUK1Q16774 197 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 ZNF181Q2M3W8 571 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 LRRC25Q8N386 305 aaPredicted RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 OR13C8Q8NGS7 320 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 ZNF675Q8TD23 568 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 ZCCHC13Q8WW36 166 aaKnown RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 ERMAPQ96PL5 475 aaPredicted RBP1.34□□□□□ -2.19
CD44-234ENST00000531873 SLC22A13Q9Y226 551 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 PKIGQ9Y2B9 76 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 ZNF337Q9Y3M9 751 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 CCDC88BA6NC98 1476 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 MYOM1P52179 1685 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 SHPRHQ149N8 1683 aa1.34□□□□□ -2.19
CD44-234ENST00000531873 CEP290O15078 2479 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 GOLGB1Q14789 3259 aaKnown RBP1.34□□□□□ -2.2
CD44-234ENST00000531873 ADGRB3O60242 1522 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 MAP3K1Q13233 1512 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.34□□□□□ -2.2
CD44-234ENST00000531873 ZFHX4Q86UP3 3567 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 FREM1Q5H8C1 2179 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 SCN10AQ9Y5Y9 1956 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 REREQ9P2R6 1566 aa1.34□□□□□ -2.2
CD44-234ENST00000531873 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 NCOA3Q9Y6Q9 1424 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 MYO9AB2RTY4 2548 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 PLXND1Q9Y4D7 1925 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 PZPP20742 1482 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 RP1P56715 2156 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 KNCNA6PVL3 124 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 BHLHE40O14503 412 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 NPYP01303 97 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 TFPTP0C1Z6 253 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 CSRP1P21291 193 aaKnown RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 HIST1H1TP22492 207 aaPredicted RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 RAP1GDS1P52306 607 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 FXYD7P58549 80 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 POLR2GP62487 172 aaKnown RBP eCLIP1.33□□□□□ -2.2
CD44-234ENST00000531873 MRPS15P82914 257 aaKnown RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 GNA12Q03113 381 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 SRSF6Q13247 344 aaKnown RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 GLT6D1Q7Z4J2 308 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 CNBD2Q96M20 576 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 OR52E6Q96RD3 313 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 MIEN1Q9BRT3 115 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 CISHQ9NSE2 258 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 MRPL27Q9P0M9 148 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms