RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 IAH1Q2TAA2 248 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 OR4A47Q6IF82 309 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 FAM53AQ6NSI3 398 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 SHISA2Q6UWI4 295 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF429Q86V71 674 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 SELENOHQ8IZQ5 122 aaKnown RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 Q8N9W7 124 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 OR5M8Q8NGP6 311 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 OR52E5Q8NH55 327 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 GRPEL2Q8TAA5 225 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 GLYATL2Q8WU03 294 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 C17orf50Q8WW18 174 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 WFDC12Q8WWY7 111 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM230Q96A57 120 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 HINT2Q9BX68 163 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 CHIAQ9BZP6 476 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 FBXL15Q9H469 300 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 PARP11Q9NR21 331 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 GAR1Q9NY12 217 aaKnown RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 GSKIPQ9P0R6 139 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 CACNG5Q9UF02 275 aa3.81□□□□□ -1.8
SSBP3-213ENST00000530618 TET2Q6N021 2002 aaPredicted RBP3.81□□□□□ -1.8
SSBP3-213ENST00000530618 A0A0G2JLM5 398 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 H3BUA1 57 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ST8SIA3O43173 380 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 SCGB1D2O95969 90 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 OPN1MWP04001 364 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 OPN1MW2P0DN77 364 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 OPN1MW3P0DN78 364 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 C4BPBP20851 252 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 S100A7P31151 101 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 HTR2BP41595 481 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 NKX2-1P43699 371 aaPredicted RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 S100A10P60903 97 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 HSPE1P61604 102 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 RPL23AP62750 156 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 DEFA6Q01524 100 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 EXOSC2Q13868 293 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 AKIRIN2Q53H80 203 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 CXorf66Q5JRM2 361 aaPredicted RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 GGNBP1Q5YKI7 109 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ETFRF1Q6IPR1 90 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 TEX38Q6PEX7 206 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 UNQ5815/PRO19632Q6UWF5 114 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 CENPVQ7Z7K6 275 aaPredicted RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 STX12Q86Y82 276 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 PUSL1Q8N0Z8 303 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 DYNAPQ8N1N2 210 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 FAM71E2Q8N5Q1 922 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 Q8N6K4 173 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 THAP6Q8TBB0 222 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 SRSF12Q8WXF0 261 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 DCUN1D4Q92564 292 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 SEC22AQ96IW7 307 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 CYYR1Q96J86 154 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 C2orf50Q96LR7 162 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 FYTTD1Q96QD9 318 aaKnown RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 RAB40CQ96S21 281 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 GPHA2Q96T91 129 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 CITED1Q99966 193 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 SEC22CQ9BRL7 303 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 NMES1Q9C002 83 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 SLA2Q9H6Q3 261 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 HEYLQ9NQ87 328 aaPredicted RBP3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ZC4H2Q9NQZ6 224 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF355PQ9NSJ1 428 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 TMEM14BQ9NUH8 114 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 MGAT4CQ9UBM8 478 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF580Q9UK33 172 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 ALG5Q9Y673 324 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 U3KQ87 197 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 CSMD3Q7Z407 3707 aa3.8□□□□□ -1.8
SSBP3-213ENST00000530618 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 C7orf66A4D0T2 115 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 FAM223BA6NKX1 122 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 PROP1O75360 226 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 IFNA10P01566 189 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 IGHG2P01859 326 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 IGF1P05019 195 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 FABP1P07148 127 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 GIPP09681 153 aaPredicted RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 OR8U8P0C7N1 319 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 OR9G9P0C7N8 305 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 VSIG10L2P0DP72 767 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 TAS2R30P59541 319 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 OR2B8PP59922 312 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 RAP2BP61225 183 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 RRAS2P62070 204 aaPredicted RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 SUPT4H1P63272 117 aaKnown RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 HBG1P69891 147 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 HBG2P69892 147 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 CX3CL1P78423 397 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms