RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FGF23Q9GZV9 251 aaPredicted RBP10.32□□□□□ -0.76
SCN3B-206ENST00000530277 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 CBY1Q9Y3M2 126 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 IGHV3OR16-13A0A075B7E8 117 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 IGHV3-74A0A0B4J1X5 117 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 KBTBD11O94819 623 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 CD3EP07766 207 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HSPE1P61604 102 aaKnown RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 DUX4L9Q6RFH8 374 aaPredicted RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 KDF1Q8NAX2 398 aaPredicted RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 OR10W1Q8NGF6 305 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 ZNF714Q96N38 554 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 ASCL3Q9NQ33 180 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 CEACAM18A8MTB9 384 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 B4DEV8 164 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 SLC31A2O15432 143 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BKO60814 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BJP06899 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BOP23527 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BBP33778 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BDP58876 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BCP62807 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST2H2BEQ16778 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 Q56UQ5 140 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 OR4A47Q6IF82 309 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BHQ93079 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BNQ99877 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HIST1H2BMQ99879 126 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 CISD1Q9NZ45 108 aaKnown RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
SCN3B-206ENST00000530277 ELOBQ15370 118 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 ASPHD1Q5U4P2 390 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 SPSB4Q96A44 273 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 COQ2Q96H96 371 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 TBX15Q96SF7 602 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 HSPB9Q9BQS6 159 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 VPS25Q9BRG1 176 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 DMRT1Q9Y5R6 373 aa10.31□□□□□ -0.76
SCN3B-206ENST00000530277 CCL21O00585 134 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CFPP27918 469 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 OR1L8Q8NGR8 309 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 PRNDQ9UKY0 176 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 A6NNC1 897 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 IQCF6A8MYZ5 107 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 NUBP1P53384 320 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 TPPP2P59282 170 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 SRSF4Q08170 494 aaKnown RBP10.3□□□□□ -0.76
SCN3B-206ENST00000530277 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 NABP2Q9BQ15 211 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 SAA2-SAA4A0A096LPE2 208 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 LY6HO94772 140 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CLEC3BP05452 202 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 SAA2P0DJI9 122 aaPredicted RBP10.3□□□□□ -0.76
SCN3B-206ENST00000530277 CT45A10P0DMU9 189 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 RPL23P62829 140 aaKnown RBP10.3□□□□□ -0.76
SCN3B-206ENST00000530277 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
SCN3B-206ENST00000530277 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 ZNF585BQ52M93 769 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
SCN3B-206ENST00000530277 EML5Q05BV3 1969 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 C5orf52A6NGY3 159 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 ERASQ7Z444 233 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 USP34Q70CQ2 3546 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 IL6RP08887 468 aaPredicted RBP10.29□□□□□ -0.76
SCN3B-206ENST00000530277 USF1P22415 310 aaPredicted RBP10.29□□□□□ -0.76
SCN3B-206ENST00000530277 BSPH1Q075Z2 132 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 Q6P435 159 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 PDE6DO43924 150 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 GLRXP35754 106 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 PKIAP61925 76 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 C1QL4Q86Z23 238 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 ST6GALNAC3Q8NDV1 305 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
SCN3B-206ENST00000530277 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
SCN3B-206ENST00000530277 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 CD40P25942 277 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 CD81P60033 236 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms