RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 MFSD2BA6NFX1 497 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 CLEC3BP05452 202 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 PTHLHP12272 177 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 TAS2R20P59543 309 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 ERVK-16P61578 105 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 GPR107Q5VW38 600 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 PLET1Q6UQ28 207 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 HSD17B13Q7Z5P4 300 aaPredicted RBP11.71□□□□□ -0.53
CTSB-215ENST00000528965 DMBX1Q8NFW5 382 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 OR5AP2Q8NGF4 316 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 AP3S1Q92572 193 aa11.71□□□□□ -0.53
CTSB-215ENST00000528965 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.53
CTSB-215ENST00000528965 MRPL27Q9P0M9 148 aaKnown RBP11.71□□□□□ -0.53
CTSB-215ENST00000528965 SULT1C2O00338 296 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 APOC4P55056 127 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 ZNF585BQ52M93 769 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 AADACL3Q5VUY0 350 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 OR5H2Q8NGV7 314 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 ZNF502Q8TBZ5 544 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
CTSB-215ENST00000528965 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 COMMD9Q9P000 198 aa11.7□□□□□ -0.54
CTSB-215ENST00000528965 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 UPK2O00526 184 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 PMP2P02689 132 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTSB-215ENST00000528965 TAS2R46P59540 309 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 TSPAN5P62079 268 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 GDPD1Q8N9F7 314 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 OR51H1Q8NH63 302 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 PLEKHA2Q9HB19 425 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 SELENOKQ9Y6D0 94 aa11.69□□□□□ -0.54
CTSB-215ENST00000528965 EPPK1P58107 5090 aaKnown RBP11.68□□□□□ -0.54
CTSB-215ENST00000528965 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 CGB1A6NKQ9 187 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 TGOLN2O43493 480 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
CTSB-215ENST00000528965 APOA1P02647 267 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 SNX29P2Q8IUI4 249 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 OR2C3Q8N628 320 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 GIMAP1Q8WWP7 306 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 ATP6V0BQ99437 205 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 ZNF436Q9C0F3 470 aaPredicted RBP11.68□□□□□ -0.54
CTSB-215ENST00000528965 C5orf66Q9H5L9 145 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 DAZ1Q9NQZ3 744 aaKnown RBP11.68□□□□□ -0.54
CTSB-215ENST00000528965 TP53TG1Q9Y2A0 90 aa11.68□□□□□ -0.54
CTSB-215ENST00000528965 UBE2CO00762 179 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 HPGDSO60760 199 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 S1PR2O95136 353 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 EIF4EP06730 217 aaKnown RBP11.67□□□□□ -0.54
CTSB-215ENST00000528965 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 ZNF182P17025 639 aaPredicted RBP11.67□□□□□ -0.54
CTSB-215ENST00000528965 S100GP29377 79 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 ZNF818PQ6ZRF7 136 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 OR6F1Q8NGZ6 308 aa11.67□□□□□ -0.54
CTSB-215ENST00000528965 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
CTSB-215ENST00000528965 ZNF2Q9BSG1 426 aaPredicted RBP11.67□□□□□ -0.54
CTSB-215ENST00000528965 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 MARCH11A6NNE9 402 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 TSPAN4O14817 238 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 RGS5O15539 181 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 OR13C7P0DN81 318 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 HLA-DMAP28067 261 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 BMI1P35226 326 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 RFX2P48378 723 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 Q6ZWC4 215 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
CTSB-215ENST00000528965 LSM10Q969L4 123 aaKnown RBP11.66□□□□□ -0.54
CTSB-215ENST00000528965 NAA50Q9GZZ1 169 aaKnown RBP11.66□□□□□ -0.54
CTSB-215ENST00000528965 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 OR4C46A6NHA9 309 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 NDUFA4O00483 81 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 SMIM18P0DKX4 95 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 ELK1P19419 428 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 PMS2P11Q13670 270 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 SLC25A24Q6NUK1 477 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 CLVS1Q8IUQ0 354 aaPredicted RBP11.65□□□□□ -0.54
CTSB-215ENST00000528965 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 TMEM217Q8N7C4 229 aa11.65□□□□□ -0.54
CTSB-215ENST00000528965 C15orf40Q8WUR7 153 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms