RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 VPS13AQ96RL7 3174 aa15.01□□□□□ -0.01
LTBP3-210ENST00000528516 OOEPA6NGQ2 149 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 FAM90A27PA6NNH2 459 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 HSBP1O75506 76 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 CD99P14209 185 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 OR4A47Q6IF82 309 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 FADS6Q8N9I5 356 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 HES4Q9HCC6 221 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 DNPH1O43598 174 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 RBP4P02753 201 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 RPL39P5Q59GN2 51 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 GCSAMLQ5JQS6 135 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 FAM214BQ7L5A3 538 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 ITLN1Q8WWA0 313 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 MAJINQ3KP22 176 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 HIF1ANQ9NWT6 349 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 COX11Q9Y6N1 276 aa15□□□□□ -0.01
LTBP3-210ENST00000528516 SERTM2A0A1B0GWG4 89 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 RBFOX2O43251 390 aaKnown RBP eCLIP14.99□□□□□ -0.013e-8■■■□□ 15.3
LTBP3-210ENST00000528516 NDUFB8O95169 186 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 FAM53AQ6NSI3 398 aaPredicted RBP14.99□□□□□ -0.01
LTBP3-210ENST00000528516 ST6GALNAC6Q969X2 333 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 LOXL4Q96JB6 756 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 RPL11P62913 178 aaKnown RBP14.99□□□□□ -0.01
LTBP3-210ENST00000528516 SP5Q6BEB4 398 aaPredicted RBP14.99□□□□□ -0.01
LTBP3-210ENST00000528516 LCN12Q6JVE5 192 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 CD1BP29016 333 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 FOXL1Q12952 345 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 KCNMB1Q16558 191 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 RPEL1Q2QD12 228 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 Q6ZPA2 131 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 QTRT1Q9BXR0 403 aaKnown RBP14.99□□□□□ -0.01
LTBP3-210ENST00000528516 CHRNA10Q9GZZ6 450 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 GNB4Q9HAV0 340 aa14.99□□□□□ -0.01
LTBP3-210ENST00000528516 ZNF891A8MT65 544 aaPredicted RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 C17orf98A8MV24 154 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 HSBP1L1C9JCN9 74 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 IGLC2P0DOY2 106 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 IGLC3P0DOY3 106 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 GNG4P50150 75 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 LGALS4P56470 323 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 FXYD3Q14802 87 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 RSPO1Q2MKA7 263 aaPredicted RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 TECRQ9NZ01 308 aaKnown RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 PLXNB1O43157 2135 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 TMEM265A0A087WTH1 108 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 NPPCP23582 126 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 CTSSP25774 331 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 NABP1Q96AH0 204 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 GUCD1Q96NT3 240 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 WASHC3Q9Y3C0 194 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 ARL2-SNX15V9GYD0 113 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 SCO2A0A1W2PP80 73 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 ZNF716A6NP11 495 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 GATA2P23769 480 aaPredicted RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 PSG7Q13046 419 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 HCP5Q6MZN7 132 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 CORO2AQ92828 525 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 C12orf77C9JDV5 145 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 RAMP3O60896 148 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 SRIP30626 198 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 UBE2L3P68036 154 aaKnown RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 KRTCAP3Q53RY4 240 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 SAXO1Q8IYX7 474 aa14.98□□□□□ -0.01
LTBP3-210ENST00000528516 REPIN1Q9BWE0 567 aaKnown RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 ZNF703Q9H7S9 590 aaPredicted RBP14.98□□□□□ -0.01
LTBP3-210ENST00000528516 OCC1Q8TAD7 63 aa14.97□□□□□ -0.01
LTBP3-210ENST00000528516 NPY1RP25929 384 aa14.97□□□□□ -0.01
LTBP3-210ENST00000528516 MPV17P39210 176 aa14.97□□□□□ -0.01
LTBP3-210ENST00000528516 BHLHA15Q7RTS1 189 aaPredicted RBP14.97□□□□□ -0.01
LTBP3-210ENST00000528516 C17orf82Q86X59 251 aaPredicted RBP14.97□□□□□ -0.01
LTBP3-210ENST00000528516 GPX1P07203 203 aa14.97□□□□□ -0.01
LTBP3-210ENST00000528516 TAS2R45P59539 299 aa14.97□□□□□ -0.01
LTBP3-210ENST00000528516 ABCA2Q9BZC7 2435 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 IGKV1-5P01602 117 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 REG1AP05451 166 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 SRSF6Q13247 344 aaKnown RBP14.96□□□□□ -0.01
LTBP3-210ENST00000528516 RNASEKQ6P5S7 137 aaKnown RBP14.96□□□□□ -0.01
LTBP3-210ENST00000528516 HARBI1Q96MB7 349 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 NPCDR1Q9BY65 106 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 KCNIP2Q9NS61 270 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 CHD8Q9HCK8 2581 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 J3QR06 171 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 TSPOP30536 169 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 MMD2Q8IY49 270 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 PRDM14Q9GZV8 571 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 ADAMTS9Q9P2N4 1935 aa14.96□□□□□ -0.01
LTBP3-210ENST00000528516 IGKV1-6A0A0C4DH72 117 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 NCBP2LA6PVI3 153 aaKnown RBP14.96□□□□□ -0.02
LTBP3-210ENST00000528516 C9orf172C9J069 976 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 NTF4P34130 210 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 RELBQ01201 579 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 ZNF295-AS1Q8N0V1 137 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 NGBQ9NPG2 151 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 SELENOKQ9Y6D0 94 aa14.96□□□□□ -0.02
LTBP3-210ENST00000528516 ODAMA1E959 279 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 C21orf140B9A014 251 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 NDUFB3O43676 98 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 CT45A6P0DMU7 189 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms