RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TRAV3A0A0B4J244 114 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 IGLC7A0M8Q6 106 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 IZUMO1RA6ND01 250 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 C2orf70A6NJV1 201 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 PPP5D1E7EU14 171 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 GPR31O00270 319 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 CYB5BO43169 146 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 S1PR2O95136 353 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 OR2C1O95371 312 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 EIF4EP06730 217 aaKnown RBP7.91□□□□□ -1.14
CPSF1-203ENST00000527916 MYOD1P15172 320 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 ARL3P36405 182 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 RORCP51449 518 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 UCP3P55916 312 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 VBP1P61758 197 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 NCS1P62166 190 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 DEFB114Q30KQ6 69 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 FAM106AQ4KMX7 169 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 CEMP1Q6PRD7 247 aaPredicted RBP7.91□□□□□ -1.14
CPSF1-203ENST00000527916 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
CPSF1-203ENST00000527916 CCDC140Q96MF4 163 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 ATP6V0BQ99437 205 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 QTRT1Q9BXR0 403 aaKnown RBP7.91□□□□□ -1.14
CPSF1-203ENST00000527916 ZC4H2Q9NQZ6 224 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 COMMD3Q9UBI1 195 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 MUC4Q99102 2169 aa7.91□□□□□ -1.14
CPSF1-203ENST00000527916 TEX50A0A1B0GTY4 177 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 MARCH11A6NNE9 402 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 A8MWP6 167 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 SERPINE2P07093 398 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 TRAPPC2P0DI81 140 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 TRAPPC2BP0DI82 140 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 FOLR2P14207 255 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 CBLN1P23435 193 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 PTBP1P26599 531 aaKnown RBP eCLIP7.9□□□□□ -1.14
CPSF1-203ENST00000527916 S100GP29377 79 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 HRH1P35367 487 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 ERVK-16P61578 105 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 CD300EQ496F6 205 aaPredicted RBP7.9□□□□□ -1.14
CPSF1-203ENST00000527916 ZNF585BQ52M93 769 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 MZT2AQ6P582 158 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 CLEC19AQ6UXS0 136 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 C19orf35Q6ZS72 473 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 DEFB125Q8N687 156 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 OR1L8Q8NGR8 309 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 VN1R17PQ8TDU5 208 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 FCAMRQ8WWV6 532 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 SRD5A3Q9H8P0 318 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 NDUFA4L2Q9NRX3 87 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 FKBP11Q9NYL4 201 aa7.9□□□□□ -1.14
CPSF1-203ENST00000527916 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 DEDDO75618 318 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
CPSF1-203ENST00000527916 RLN1P04808 185 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 REG1AP05451 166 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 CLEC3BP05452 202 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 ELK1P19419 428 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 HLA-DMAP28067 261 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 RCVRNP35243 200 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 LPAR6P43657 344 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 TSPAN5P62079 268 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 LGALS9CQ6DKI2 356 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 GDPD1Q8N9F7 314 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 DYNLRB2Q8TF09 96 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 AP3S1Q92572 193 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 TSC22D3Q99576 134 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 FXYD6Q9H0Q3 95 aa7.89□□□□□ -1.15
CPSF1-203ENST00000527916 MFSD2BA6NFX1 497 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 HPGDSO60760 199 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 SNAPC5O75971 98 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 GABARAPO95166 117 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 KRASP01116 189 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 IGHV3-23P01764 117 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 C8orf88P0DMB2 117 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 OR13C7P0DN81 318 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF182P17025 639 aaPredicted RBP7.88□□□□□ -1.15
CPSF1-203ENST00000527916 ELLP55199 621 aaPredicted RBP7.88□□□□□ -1.15
CPSF1-203ENST00000527916 WT1-ASQ06250 92 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 CTF1Q16619 201 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 OR10W1Q8NGF6 305 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 OR1L6Q8NGR2 347 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 OR5B3Q8NH48 314 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 C15orf40Q8WUR7 153 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
CPSF1-203ENST00000527916 MARC2Q969Z3 335 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM56Q96MV1 263 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM14BQ9NUH8 114 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 PRNDQ9UKY0 176 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
CPSF1-203ENST00000527916 TRAV25A0A0B4J276 109 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM213A2RRL7 107 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 CD7P09564 240 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 G6PCP35575 357 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF57Q68EA5 555 aaPredicted RBP7.87□□□□□ -1.15
CPSF1-203ENST00000527916 SLC25A24Q6NUK1 477 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 SPSB3Q6PJ21 355 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 PLET1Q6UQ28 207 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms