RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TRAV25A0A0B4J276 109 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 TRAPPC2P0DI81 140 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 TRAPPC2BP0DI82 140 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 OR13C7P0DN81 318 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 SLC38A6Q8IZM9 456 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 LYSTQ99698 3801 aa16.75■□□□□ 0.27
TRAPPC4-208ENST00000527680 GNRHRP30968 328 aa16.74■□□□□ 0.27
TRAPPC4-208ENST00000527680 ELLP55199 621 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC4-208ENST00000527680 TEX50A0A1B0GTY4 177 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 OR2T8A6NH00 312 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 XRCC3O43542 346 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 C8orf88P0DMB2 117 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 RFX2P48378 723 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 OR2C3Q8N628 320 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 TSPAN14Q8NG11 270 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 OR1L8Q8NGR8 309 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 VN1R17PQ8TDU5 208 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 COMMD9Q9P000 198 aa16.73■□□□□ 0.27
TRAPPC4-208ENST00000527680 TGOLN2O43493 480 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 SNAPC5O75971 98 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 PMP2P02689 132 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 SERPINE2P07093 398 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 THOC7Q6I9Y2 204 aaKnown RBP16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 HSD17B13Q7Z5P4 300 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 GDPD1Q8N9F7 314 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 OVOL2Q9BRP0 275 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 ZNF2Q9BSG1 426 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 DNAH1Q9P2D7 4330 aa16.72■□□□□ 0.27
TRAPPC4-208ENST00000527680 IGHV3-21A0A0B4J1V1 117 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 TMEM127O75204 238 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 PGLYRP1O75594 196 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 KRASP01116 189 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 RLN1P04808 185 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 F2RP25116 425 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 LPAR6P43657 344 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 LAMTOR1Q6IAA8 161 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 DHRS11Q6UWP2 260 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 CROCCP3Q8IVE0 287 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 CMTM1Q8IZ96 169 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 C20orf24Q9BUV8 137 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 ZNF436Q9C0F3 470 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 C5orf66Q9H5L9 145 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 UBQLN2Q9UHD9 624 aa16.71■□□□□ 0.27
TRAPPC4-208ENST00000527680 MARCH11A6NNE9 402 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 FGF2P09038 288 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 WT1-ASQ06250 92 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 TMEM69Q5SWH9 247 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 UBAC2Q8NBM4 344 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 OR5H2Q8NGV7 314 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 NSG2Q9Y328 171 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 OR51B2Q9Y5P1 312 aa16.7■□□□□ 0.26
TRAPPC4-208ENST00000527680 G6PCP35575 357 aa16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 UBE2NLQ5JXB2 153 aa16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 OR6F1Q8NGZ6 308 aa16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 FCAMRQ8WWV6 532 aa16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 MOB3AQ96BX8 217 aa16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 DGCR14Q96DF8 476 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 BSCL2Q96G97 398 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 SPAG8Q99932 426 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 DAZ1Q9NQZ3 744 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-208ENST00000527680 APOC4P55056 127 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 TAS2R46P59540 309 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 SPSB3Q6PJ21 355 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 SAMD12Q8N8I0 201 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 TMEM190Q8WZ59 177 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 LSM10Q969L4 123 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 NDUFA4L2Q9NRX3 87 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 C21orf62Q9NYP8 219 aa16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 F11RQ9Y624 299 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-208ENST00000527680 IGHV3OR16-8A0A075B7F1 116 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 CXorf65A6NEN9 183 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 PRSS3P35030 304 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 TGFBR1P36897 503 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 Q56UQ5 140 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 SCARB1Q8WTV0 552 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 TMEM56Q96MV1 263 aa16.67■□□□□ 0.26
TRAPPC4-208ENST00000527680 GPR31O00270 319 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 NDUFA4O00483 81 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 TSPAN4O14817 238 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 SPRY2O43597 315 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 ZNF207O43670 478 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 RPS19P39019 145 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 TAS2R20P59543 309 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 TSPAN5P62079 268 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 LSM3P62310 102 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 PMS2P11Q13670 270 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 CHRDL1Q9BU40 450 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 FKBP11Q9NYL4 201 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 PRNDQ9UKY0 176 aa16.66■□□□□ 0.26
TRAPPC4-208ENST00000527680 S100GP29377 79 aa16.65■□□□□ 0.26
TRAPPC4-208ENST00000527680 MFAP2P55001 183 aa16.65■□□□□ 0.26
TRAPPC4-208ENST00000527680 A0A0J9YWU9 116 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 HLA-DMAP28067 261 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 BMI1P35226 326 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 DEFB135Q30KP9 77 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 KCTD21Q4G0X4 260 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 PHLDA2Q53GA4 152 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 Q6ZWC4 215 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 STPG3Q8N7X2 389 aa16.64■□□□□ 0.25
TRAPPC4-208ENST00000527680 OR4C46A6NHA9 309 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms