RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 LGI3Q8N145 548 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 OR1L8Q8NGR8 309 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 OR5B3Q8NH48 314 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 RRNAD1Q96FB5 475 aaKnown RBP12.96□□□□□ -0.33
SMCO4-204ENST00000527149 FYTTD1Q96QD9 318 aaKnown RBP12.96□□□□□ -0.33
SMCO4-204ENST00000527149 PHB2Q99623 299 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
SMCO4-204ENST00000527149 SHPKQ9UHJ6 478 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 ZNF257Q9Y2Q1 563 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 OR51B2Q9Y5P1 312 aa12.96□□□□□ -0.33
SMCO4-204ENST00000527149 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-204ENST00000527149 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
SMCO4-204ENST00000527149 NBEAL1Q6ZS30 2694 aa12.96□□□□□ -0.34
SMCO4-204ENST00000527149 TCRBV4S1A1TA0A5B7 111 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 NPIPB5A8MRT5 1133 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 H3BUA1 57 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 PF4V1P10720 104 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 WT1-ASQ06250 92 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
SMCO4-204ENST00000527149 TTC9CQ8N5M4 171 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 OR10W1Q8NGF6 305 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 ENKURQ8TC29 256 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 GPR146Q96CH1 333 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
SMCO4-204ENST00000527149 DUXBA0A1W2PPF3 345 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 DUS4LO95620 317 aaKnown RBP12.94□□□□□ -0.34
SMCO4-204ENST00000527149 TSPAN15O95858 294 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 CRYGCP07315 174 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 H2AFB2P0C5Z0 115 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 CTRB1P17538 263 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 RAB9AP51151 201 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 DEFA1P59665 94 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 DEFA3P59666 94 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 OR52B4Q8NGK2 314 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 PALMDQ9NP74 551 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 ZFP57Q9NU63 452 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 FKBP11Q9NYL4 201 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 CACNG5Q9UF02 275 aa12.94□□□□□ -0.34
SMCO4-204ENST00000527149 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 PSMB6P28072 239 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 HSPE1P61604 102 aaKnown RBP12.93□□□□□ -0.34
SMCO4-204ENST00000527149 PRCDQ00LT1 54 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 C4orf46Q504U0 113 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 RNASE11Q8TAA1 199 aaKnown RBP12.93□□□□□ -0.34
SMCO4-204ENST00000527149 MITD1Q8WV92 249 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 SLA2Q9H6Q3 261 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 GNB4Q9HAV0 340 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
SMCO4-204ENST00000527149 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 PRH1P02810 166 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 REG1AP05451 166 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 SPNP16150 400 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
SMCO4-204ENST00000527149 RAB25P57735 213 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 C2orf68Q2NKX9 166 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
SMCO4-204ENST00000527149 ETV3LQ6ZN32 361 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 SEC22CQ9BRL7 303 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 NOTCH1P46531 2555 aa12.92□□□□□ -0.34
SMCO4-204ENST00000527149 INS-IGF2F8WCM5 200 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 PITX3O75364 302 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 TPPP2P59282 170 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 DEFA5Q01523 94 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 TMEM65Q6PI78 240 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
SMCO4-204ENST00000527149 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 MARVELD1Q9BSK0 173 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 HINT2Q9BX68 163 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.91□□□□□ -0.34
SMCO4-204ENST00000527149 TMED3Q9Y3Q3 217 aa12.91□□□□□ -0.34
SMCO4-204ENST00000527149 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 I3L521 148 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 M0QZ24 198 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 TRGV3P03979 118 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 IL5P05113 134 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 MFAP2P55001 183 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 RUNX1Q01196 453 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 SPINK9Q5DT21 86 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 GGNBP1Q5YKI7 109 aa12.9□□□□□ -0.34
SMCO4-204ENST00000527149 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms