RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 DGCR14Q96DF8 476 aaKnown RBP9.06□□□□□ -0.96
SSBP3-210ENST00000525990 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 QTRT1Q9BXR0 403 aaKnown RBP9.06□□□□□ -0.96
SSBP3-210ENST00000525990 VCX3AQ9NNX9 186 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 DNAH7Q8WXX0 4024 aa9.06□□□□□ -0.96
SSBP3-210ENST00000525990 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 IGHV3OR16-8A0A075B7F1 116 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 A8MWP6 167 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 M0QYG6 137 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 GPR31O00270 319 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 SCAF4O95104 1147 aaKnown RBP9.05□□□□□ -0.96
SSBP3-210ENST00000525990 DHFRP00374 187 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 IGKV1-39P01597 117 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 IGKV1D-39P04432 117 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 LYL1P12980 280 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
SSBP3-210ENST00000525990 TAS2R46P59540 309 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 FAM209BQ5JX69 171 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 BTNL8Q6UX41 500 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 GDPD1Q8N9F7 314 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 OR6F1Q8NGZ6 308 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 AIFM2Q9BRQ8 373 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 HIPK2Q9H2X6 1198 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 SRD5A3Q9H8P0 318 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 CEPT1Q9Y6K0 416 aa9.05□□□□□ -0.96
SSBP3-210ENST00000525990 TRBV7-1A0A0A6YYK4 115 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 OR2T8A6NH00 312 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 OR11H12B2RN74 326 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-210ENST00000525990 TPPPO94811 219 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 APOA1P02647 267 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 SERPINE2P07093 398 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 ERVK-16P61578 105 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 TBC1D26Q86UD7 250 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 CD300LFQ8TDQ1 290 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 ZNF414Q96IQ9 312 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 CXorf58Q96LI9 332 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 NDUFA4L2Q9NRX3 87 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 SLC2A8Q9NY64 477 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 OR51B2Q9Y5P1 312 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
SSBP3-210ENST00000525990 CTF1Q16619 201 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 FAM106AQ4KMX7 169 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 ZNF57Q68EA5 555 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-210ENST00000525990 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 LAX1Q8IWV1 398 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 OR1L8Q8NGR8 309 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 ISOC1Q96CN7 298 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 CHRDL1Q9BU40 450 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 PALMDQ9NP74 551 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 KLK11Q9UBX7 282 aa9.03□□□□□ -0.96
SSBP3-210ENST00000525990 DYNC2H1Q8NCM8 4307 aaKnown RBP9.03□□□□□ -0.96
SSBP3-210ENST00000525990 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 K7EIM0 57 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 TGOLN2O43493 480 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 ZNF207O43670 478 aaKnown RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 PI3P19957 117 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 PTBP1P26599 531 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■■□ 23.1
SSBP3-210ENST00000525990 RCVRNP35243 200 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 ADMP35318 185 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 TSPAN5P62079 268 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 CMTM1Q8IZ96 169 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 UBAC2Q8NBM4 344 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 BORCS5Q969J3 196 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 LSM10Q969L4 123 aaKnown RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 SEC22AQ96IW7 307 aa9.02□□□□□ -0.97
SSBP3-210ENST00000525990 SRSF8Q9BRL6 282 aaKnown RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 ZNF436Q9C0F3 470 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 TECRQ9NZ01 308 aaKnown RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 F11RQ9Y624 299 aaKnown RBP9.02□□□□□ -0.97
SSBP3-210ENST00000525990 SMIM31A0A1B0GVY4 71 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 FAM25AB3EWG3 89 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 FAM25CB3EWG5 89 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 FAM25GB3EWG6 89 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 GABARAPO95166 117 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 IGHV3-48P01763 117 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 FGF2P09038 288 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 C8orf88P0DMB2 117 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 SPINK9Q5DT21 86 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 GPR107Q5VW38 600 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 OR4D10Q8NGI6 311 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 OR52B4Q8NGK2 314 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 OR52I2Q8NH67 350 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 SCARB1Q8WTV0 552 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 SCPEP1Q9HB40 452 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 TMEM14BQ9NUH8 114 aa9.01□□□□□ -0.97
SSBP3-210ENST00000525990 SNAPC5O75971 98 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms