RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 LMX1BO60663 402 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 FSTL3O95633 263 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 IGLV2-8P01709 118 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 PGAM2P15259 253 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 IMPA1P29218 277 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 S100A11P31949 105 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 GABRA3P34903 492 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 GABRA2P47869 451 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 DSCR9P59020 149 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 BIKQ13323 160 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 FHL2Q14192 279 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 TMEM69Q5SWH9 247 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 HRCT1Q6UXD1 115 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 ZNF429Q86V71 674 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 OR8I2Q8N0Y5 310 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 KRTCAP2Q8N6L1 136 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 ITLN1Q8WWA0 313 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 TMEM190Q8WZ59 177 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 F2RL3Q96RI0 385 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 TP53RKQ96S44 253 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 SOSTQ9BQB4 213 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 MED28Q9H204 178 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 LINC00597Q9H2U6 94 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 CACYBPQ9HB71 228 aaKnown RBP3.32□□□□□ -1.88
CD44-213ENST00000525209 TAAR3PQ9P1P4 343 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 NAT8BQ9UHF3 227 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 TRAPPC2LQ9UL33 140 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 HS3ST2Q9Y278 367 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 DOCK5Q9H7D0 1870 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 OTOFQ9HC10 1997 aa3.32□□□□□ -1.88
CD44-213ENST00000525209 MKI67P46013 3256 aaKnown RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 MIA3Q5JRA6 1907 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 ALPK3Q96L96 1907 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 KDM3BQ7LBC6 1761 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 DDX60LQ5H9U9 1706 aaKnown RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 IGLV8-61A0A075B6I0 122 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 IGHV3OR16-10A0A075B7F0 116 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 IGKV6D-21A0A0A0MT36 114 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 A0A1B0GW64 132 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 C20orf202A1L168 122 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 FABP5P3A8MUU1 101 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 KRBOX1C9JBD0 128 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 M0R2Z0 102 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 TRAF3IP2O43734 574 aaPredicted RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 DEDDO75618 318 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 CXorf1O96002 111 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 HLA-DQB2P05538 268 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 SMIM10L2AP0DMW4 78 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 SMIM10L2BP0DMW5 78 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 LPAR6P43657 344 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 LINC00313P59037 77 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 GNA12Q03113 381 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 DHRS2Q13268 280 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 Q6Q795 121 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 PCSK4Q6UW60 755 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 Q6ZS49 121 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 RNF165Q6ZSG1 346 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 HSD17B13Q7Z5P4 300 aaPredicted RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 MKXQ8IYA7 352 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 TCTE3Q8IZS6 198 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 LINC01555Q8NAE3 123 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 OR51T1Q8NGJ9 327 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 SLC25A40Q8TBP6 338 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 ISOC1Q96CN7 298 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 MS4A6EQ96DS6 147 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 PHYHIPLQ96FC7 376 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 SMIM14Q96QK8 99 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 SYT15Q9BQS2 421 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 OR8D2Q9GZM6 311 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 PTGES2Q9H7Z7 377 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 PLEKHF2Q9H8W4 249 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 CXorf21Q9HAI6 301 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 RPUSD1Q9UJJ7 312 aaKnown RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
CD44-213ENST00000525209 SCN10AQ9Y5Y9 1956 aa3.31□□□□□ -1.88
CD44-213ENST00000525209 PLXNA1Q9UIW2 1896 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 CLDN25C9JDP6 229 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 J3QRK9 145 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 OVOL1O14753 267 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 GSTZ1O43708 216 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 CD5LO43866 347 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF253O75346 499 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 TNFSF13O75888 250 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 NRASP01111 189 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ADRA2AP08913 450 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 BCL2P10415 239 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 CCR2P41597 374 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 LINC01547P58512 204 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 RPS11P62280 158 aaKnown RBP eCLIP3.3□□□□□ -1.88
CD44-213ENST00000525209 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 CXCL6P80162 114 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 GLYATL3Q5SZD4 288 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 HES3Q5TGS1 186 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 RASL11AQ6T310 242 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms