RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 RPS4Y2Q8TD47 263 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 POP5Q969H6 163 aaKnown RBP4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 ELSPBP1Q96BH3 223 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 BORCS8Q96FH0 119 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 C18orf12Q96KH6 178 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 NMNAT3Q96T66 252 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 PRSS27Q9BQR3 290 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 IMUPQ9GZP8 106 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 FIS1Q9Y3D6 152 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 PYGO1Q9Y3Y4 419 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 AMMECR1Q9Y4X0 333 aaPredicted RBP4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 ARAP2Q8WZ64 1704 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 TRPM3Q9HCF6 1732 aaPredicted RBP4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 MYO5CQ9NQX4 1742 aa4.41□□□□□ -1.7
EFCAB13-213ENST00000523978 BLMP54132 1417 aaPredicted RBP4.4□□□□□ -1.7
EFCAB13-213ENST00000523978 MAP2P11137 1827 aaKnown RBP4.4□□□□□ -1.7
EFCAB13-213ENST00000523978 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 IGHV3OR16-9A0A0B4J2B5 98 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ZNHIT1O43257 154 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 NDUFS5O43920 106 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 SS18L1O75177 396 aaPredicted RBP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 APOMO95445 188 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 CD55P08174 381 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ZNF83P51522 516 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 RPS11P62280 158 aaKnown RBP eCLIP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 FKBP1AP62942 108 aaKnown RBP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 HERVK_113P63121 156 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 CST6Q15828 149 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 RTL8BQ17RB0 113 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 KLF17Q5JT82 389 aaPredicted RBP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ZNF57Q68EA5 555 aaPredicted RBP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 Q6AWC8 147 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 Q6ZN92 141 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 Q6ZUT4 128 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 NEXN-AS1Q8NBZ9 246 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 OR2A12Q8NGT7 310 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 LMX1AQ8TE12 382 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 CCL17Q92583 94 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 EIF5A2Q9GZV4 153 aaKnown RBP4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 PLEKHA3Q9HB20 300 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 CALYQ9NYX4 217 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 CACNG5Q9UF02 275 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ENPP4Q9Y6X5 453 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 KIF1AQ12756 1690 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 MYH6P13533 1939 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ARHGAP5Q13017 1502 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 TRIP11Q15643 1979 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 GLI2P10070 1586 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 ABCC8Q09428 1581 aa4.4□□□□□ -1.71
EFCAB13-213ENST00000523978 DNMT1P26358 1616 aaKnown RBP4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 IGKV1D-8A0A087WSZ0 117 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 TRGV10A0A0A0MS01 117 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 ARRDC5A6NEK1 342 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 TMEM262E9PQX1 116 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 K7EP34 96 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 KLF7O75840 302 aaPredicted RBP4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 GABARAPO95166 117 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 CGAP01215 116 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 SHBGP04278 402 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 CTSEP14091 401 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 GADD45AP24522 165 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 PSMB2P49721 201 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 CCL23P55773 120 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 FAM222AQ5U5X8 452 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 RPS19BP1Q86WX3 136 aaKnown RBP4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 MSRB3Q8IXL7 192 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 SAXO1Q8IYX7 474 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 ATP6V0E2Q8NHE4 81 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 SLIRPQ9GZT3 109 aaKnown RBP4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 DEFB127Q9H1M4 99 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 VSIG4Q9Y279 399 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 TPRKBQ9Y3C4 175 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 LINC00312Q9Y6C7 94 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 SELENOKQ9Y6D0 94 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 LAMC1P11047 1609 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 PLIN4Q96Q06 1357 aa4.39□□□□□ -1.71
EFCAB13-213ENST00000523978 CDC42BPAQ5VT25 1732 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 CUX1P39880 1505 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 IGHV1OR21-1A0A087WYE8 117 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 IGLV1-36A0A0B4J1U3 117 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 TRBV7-6A0A0J9YX20 115 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 IGLC7A0M8Q6 106 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 XKRYO14609 159 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 CD5LO43866 347 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 LYZL6O75951 148 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 RBMY1CP0DJD4 496 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 OPRM1P35372 400 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 SRP14P37108 136 aaKnown RBP4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 FOXA3P55318 350 aaPredicted RBP4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 CACNG7P62955 275 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 Q0VG73 95 aa4.38□□□□□ -1.71
EFCAB13-213ENST00000523978 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms