RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 MECP2P51608 486 aaKnown RBP13.14□□□□□ -0.31
CCNC-213ENST00000523541 TAS2R19P59542 299 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 TMEM56Q96MV1 263 aa13.14□□□□□ -0.31
CCNC-213ENST00000523541 CCDC59Q9P031 241 aaKnown RBP13.14□□□□□ -0.31
CCNC-213ENST00000523541 CTDSPLO15194 276 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 CD74P04233 296 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 CD3DP04234 171 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 SERPINE2P07093 398 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 SPCS2Q15005 226 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 PHLDA2Q53GA4 152 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 GDPD1Q8N9F7 314 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 TERB2Q8NHR7 220 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 VN1R17PQ8TDU5 208 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 LSM10Q969L4 123 aaKnown RBP13.13□□□□□ -0.31
CCNC-213ENST00000523541 MIXL1Q9H2W2 232 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 OR51B2Q9Y5P1 312 aa13.13□□□□□ -0.31
CCNC-213ENST00000523541 M0QYG6 137 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 CTDSP2O14595 271 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
CCNC-213ENST00000523541 ATG12O94817 140 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 MYOD1P15172 320 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 G6PCP35575 357 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 DYNC2LI1Q8TCX1 351 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 TMEM14BQ9NUH8 114 aa13.12□□□□□ -0.31
CCNC-213ENST00000523541 TECRQ9NZ01 308 aaKnown RBP13.12□□□□□ -0.31
CCNC-213ENST00000523541 CLEC3BP05452 202 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 OR13C7P0DN81 318 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 ARL3P36405 182 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 MEF2DQ14814 521 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 STEAP1BQ6NZ63 245 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 CLEC19AQ6UXS0 136 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 Q8N1Y9 231 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 CCDC140Q96MF4 163 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 ZMAT4Q9H898 229 aa13.11□□□□□ -0.31
CCNC-213ENST00000523541 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 OR2C1O95371 312 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 RAB3DO95716 219 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 REG1AP05451 166 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 WT1-ASQ06250 92 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 SBSPONQ8IVN8 264 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 CCDC71LQ8N9Z2 235 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 SMIM4Q8WVI0 70 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 DIRAS2Q96HU8 199 aa13.1□□□□□ -0.31
CCNC-213ENST00000523541 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
CCNC-213ENST00000523541 PPP5D1E7EU14 171 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 PGAM2P15259 253 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 ELLP55199 621 aaPredicted RBP13.09□□□□□ -0.31
CCNC-213ENST00000523541 PIGPP57054 158 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
CCNC-213ENST00000523541 SLC25A24Q6NUK1 477 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 DYNLRB2Q8TF09 96 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 PALMDQ9NP74 551 aa13.09□□□□□ -0.31
CCNC-213ENST00000523541 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
CCNC-213ENST00000523541 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 A8MWP6 167 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 FOLR2P14207 255 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 HSPE1P61604 102 aaKnown RBP13.08□□□□□ -0.32
CCNC-213ENST00000523541 DEFB114Q30KQ6 69 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 OR1P1Q8NH06 330 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 MARC2Q969Z3 335 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 RCHY1Q96PM5 261 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 THAP7Q9BT49 309 aaPredicted RBP13.08□□□□□ -0.32
CCNC-213ENST00000523541 C19orf73Q9NVV2 129 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
CCNC-213ENST00000523541 COPZ2Q9P299 210 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 S4R3C0 116 aa13.08□□□□□ -0.32
CCNC-213ENST00000523541 C3orf85A0A1B0GTC6 90 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 DISC1C4P0D8 188 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 CTSDP07339 412 aaPredicted RBP13.07□□□□□ -0.32
CCNC-213ENST00000523541 IGHV4-30-4P0DP06 118 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 CBLN1P23435 193 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 IL18Q14116 193 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 RNASE12Q5GAN4 147 aaKnown RBP13.07□□□□□ -0.32
CCNC-213ENST00000523541 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 BSCL2Q96G97 398 aaPredicted RBP13.07□□□□□ -0.32
CCNC-213ENST00000523541 HINT2Q9BX68 163 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 SLIRPQ9GZT3 109 aaKnown RBP13.07□□□□□ -0.32
CCNC-213ENST00000523541 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
CCNC-213ENST00000523541 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms