RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 USE1Q9NZ43 259 aa2.08□□□□□ -2.08
HMGB1P1-201ENST00000522557 HHLA2Q9UM44 414 aa2.08□□□□□ -2.08
HMGB1P1-201ENST00000522557 HSPE1-MOB4S4R3N1 261 aa2.08□□□□□ -2.08
HMGB1P1-201ENST00000522557 PTPRJQ12913 1337 aa2.08□□□□□ -2.08
HMGB1P1-201ENST00000522557 PLXNA3P51805 1871 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 NYNRINQ9P2P1 1898 aaKnown RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 MYO5AQ9Y4I1 1855 aaKnown RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 MYO16Q9Y6X6 1858 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 AHCTF1Q8WYP5 2266 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 APC2O95996 2303 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 PTPRQQ9UMZ3 2332 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 LAMA2P24043 3122 aaKnown RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 IGF2RP11717 2491 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 SPAARA0A1B0GVQ0 90 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 A8MWP6 167 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 J3QKU1 62 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 STK16O75716 305 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 IL6P05231 212 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 IL3P08700 152 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 OCM2P0CE71 109 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 NEFHP12036 1026 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 CRYBB3P26998 211 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 AKR1C2P52895 323 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 PSG4Q00888 419 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 JOSD1Q15040 202 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 COQ5Q5HYK3 327 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 TNFAIP8L2Q6P589 184 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 LRRN1Q6UXK5 716 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 ATP5L2Q7Z4Y8 100 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 NATD1Q8N6N6 113 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 TSTD1Q8NFU3 115 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 ANP32BQ92688 251 aaKnown RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 TCEAL4Q96EI5 215 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 BCL2L14Q9BZR8 327 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 HES4Q9HCC6 221 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 MCTS1Q9ULC4 181 aaKnown RBP2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 ICE1Q9Y2F5 2266 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 MYH4Q9Y623 1939 aa2.07□□□□□ -2.08
HMGB1P1-201ENST00000522557 ASCC3Q8N3C0 2202 aaKnown RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 FOCADQ5VW36 1801 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 TRAV8-1A0A0A6YYK1 113 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 DHRS12A0PJE2 317 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 ODF3BA8MYP8 253 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 G3V3Q6 166 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 M0R381 172 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 AHSA1O95433 338 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 CRYGDP07320 174 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 ZNF7P17097 686 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 NPPCP23582 126 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 MAGOHP61326 146 aaKnown RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 LGALS9BQ3B8N2 356 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 LGALS9CQ6DKI2 356 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 Q6ZS52 159 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 C1orf174Q8IYL3 243 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 MFSD8Q8NHS3 518 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 Q8WTZ3 238 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 RNASE6Q93091 150 aaKnown RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 TMBIM1Q969X1 311 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 PTH2Q96A98 100 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 TIPINQ9BVW5 301 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 CCDC94Q9BW85 323 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 BABAM2Q9NXR7 383 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 PSORS1C2Q9UIG4 136 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 HDGFL3Q9Y3E1 203 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 PCYT1BQ9Y5K3 369 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 TRANK1O15050 2925 aa2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 SPTAN1Q13813 2472 aaKnown RBP2.06□□□□□ -2.08
HMGB1P1-201ENST00000522557 USP24Q9UPU5 2620 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 SPTBN5Q9NRC6 3674 aaKnown RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CHD9Q3L8U1 2897 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 MYH8P13535 1937 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 RP1L1Q8IWN7 2480 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 LINC00862A6NCI5 91 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 PFDN6O15212 129 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 SSNA1O43805 119 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 ZNF73O43830 326 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 LY6HO94772 140 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 KRT75O95678 551 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 MT-CO2P00403 227 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CTSGP08311 255 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 DDTP30046 118 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 RPL12P30050 165 aaKnown RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 PPP1CCP36873 323 aaKnown RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CA7P43166 264 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 SLC35A2P78381 396 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 HLA-DRB3P79483 266 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 PPP1R1AQ13522 171 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CST6Q15828 149 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 PTRHD1Q6GMV3 140 aaKnown RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CD200R1LQ6Q8B3 271 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 DEFB119Q8N690 84 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 OR11H1Q8NG94 326 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 FNDC9Q8TBE3 224 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 PIGXQ8TBF5 258 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 EEF1AKMT1Q8WVE0 214 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 ZNF471Q9BX82 626 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 DRC3Q9H069 523 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 DNAJC12Q9UKB3 198 aa2.05□□□□□ -2.08
HMGB1P1-201ENST00000522557 CCL26Q9Y258 94 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms