RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 WT1-ASQ06250 92 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 Q6ZWC4 215 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 GVQW1Q8N7I0 195 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 OR1L6Q8NGR2 347 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-210ENST00000521646 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 CCL28Q9NRJ3 127 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 TP53TG1Q9Y2A0 90 aa8.12□□□□□ -1.11
CSMD1-210ENST00000521646 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 RGS10O43665 173 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 FCER2P06734 321 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 HLA-GP17693 338 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 NAT1P18440 290 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 BMI1P35226 326 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
CSMD1-210ENST00000521646 RPL8P62917 257 aaKnown RBP8.11□□□□□ -1.11
CSMD1-210ENST00000521646 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 OR4S2Q8NH73 311 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 ATG5Q9H1Y0 275 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 TMPRSS5Q9H3S3 457 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 MAP6D1Q9H9H5 199 aa8.11□□□□□ -1.11
CSMD1-210ENST00000521646 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 TSPAN4O14817 238 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 DEFB4AO15263 64 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 PSMD7P51665 324 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 MRPS15P82914 257 aaKnown RBP8.1□□□□□ -1.11
CSMD1-210ENST00000521646 FAM106AQ4KMX7 169 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 LGALS9CQ6DKI2 356 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 C22orf42Q6IC83 251 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 PRSS48Q7RTY5 328 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 SLC25A42Q86VD7 318 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 SLC25A38Q96DW6 304 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 HSD17B10Q99714 261 aaKnown RBP8.1□□□□□ -1.11
CSMD1-210ENST00000521646 C5orf66Q9H5L9 145 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 ACOT13Q9NPJ3 140 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 NDUFB11Q9NX14 153 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 BET1LQ9NYM9 111 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 MRPL27Q9P0M9 148 aaKnown RBP8.1□□□□□ -1.11
CSMD1-210ENST00000521646 ANXA10Q9UJ72 324 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 PRELID3BQ9Y3B1 194 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 HSPG2P98160 4391 aa8.1□□□□□ -1.11
CSMD1-210ENST00000521646 IGHV3-49A0A0A0MS15 119 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 TRBV7-1A0A0A6YYK4 115 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 DPPA5A6NC42 116 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 K7EIM0 57 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 SULT1C2O00338 296 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 UPK2O00526 184 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 TGOLN2O43493 480 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 CLEC2LP0C7M8 214 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 RAB3BP20337 219 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 GADD45AP24522 165 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 PSMA1P25786 263 aaKnown RBP8.09□□□□□ -1.11
CSMD1-210ENST00000521646 PTBP1P26599 531 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSMD1-210ENST00000521646 MAS1LP35410 378 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 ICAM4Q14773 271 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 TRAM1Q15629 374 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 CNIH2Q6PI25 160 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 OR5H6Q8NGV6 325 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 SPAG8Q99932 426 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-210ENST00000521646 CCDC90BQ9GZT6 254 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 RNF167Q9H6Y7 350 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 SCN3BQ9NY72 215 aa8.09□□□□□ -1.11
CSMD1-210ENST00000521646 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
CSMD1-210ENST00000521646 AGRNO00468 2067 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 TRDV1A0A1B0GX56 115 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 EBAG9O00559 213 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 CREBL2O60519 120 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-210ENST00000521646 CTSDP07339 412 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-210ENST00000521646 GIG44P09565 113 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-210ENST00000521646 CD36P16671 472 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 GALP22466 123 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 TALDO1P37837 337 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 TBCEQ15813 527 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-210ENST00000521646 POU2AF1Q16633 256 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 ZNF818PQ6ZRF7 136 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 RBPMS2Q6ZRY4 209 aaKnown RBP8.08□□□□□ -1.12
CSMD1-210ENST00000521646 SPAG16Q8N0X2 631 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 FAM24BQ8N5W8 94 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 OR13F1Q8NGS4 319 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 LGALS14Q8TCE9 139 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 SECTM1Q8WVN6 248 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 RNF2Q99496 336 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 NSG2Q9Y328 171 aa8.08□□□□□ -1.12
CSMD1-210ENST00000521646 IGHV3OR16-13A0A075B7E8 117 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 IGHV3-74A0A0B4J1X5 117 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 KIR2DL5BA0A0G2JN68 375 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 KIR2DL5BA0A0G2JPC4 375 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 TEX50A0A1B0GTY4 177 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 DEFA4P12838 97 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 FCGR2CP31995 323 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 APOC4P55056 127 aa8.07□□□□□ -1.12
CSMD1-210ENST00000521646 ELLP55199 621 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms