RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SH2D7A6NKC9 451 aaPredicted RBP5.58□□□□□ -1.52
CPNE3-203ENST00000517490 RIGQ13278 110 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 PNKDQ8N490 385 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 Q8NFD4 153 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 OR1L8Q8NGR8 309 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 hADV38S2A0JD32 116 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 SPRY3O43610 288 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 CA2P00918 260 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 GPX1P07203 203 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 CD40P25942 277 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 SELENOTP62341 195 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 TREML4Q6UXN2 200 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 C20orf204Q6ZNR8 217 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 COLCA1Q6ZS62 124 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 FAM19A2Q8N3H0 131 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 OR52E5Q8NH55 327 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 RNF138Q8WVD3 245 aa5.58□□□□□ -1.52
CPNE3-203ENST00000517490 RTTNQ86VV8 2226 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RRHO14718 337 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RBFOX2O43251 390 aaKnown RBP eCLIP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 IGKV1D-33P01593 117 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 IGKV1-33P01594 117 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 IGKV1-39P01597 117 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 IGKV1D-39P04432 117 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 CA7P43166 264 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 ALKBH6Q3KRA9 238 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 ACP7Q6ZNF0 438 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 CENPVQ7Z7K6 275 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 OR8B2Q96RD0 313 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 GGTLC1Q9BX51 225 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 PHF3Q92576 2039 aaKnown RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 M0R1B8 84 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 NPSP0C0P6 89 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 ORM2P19652 201 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 COL8A1P27658 744 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 SCGB2A2Q13296 93 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 EFNB3Q15768 340 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 Q6P435 159 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 TEX43Q6ZNM6 134 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 PPP1R32Q7Z5V6 425 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 VKORC1L1Q8N0U8 176 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 KLF14Q8TD94 323 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 DIRC2Q96SL1 478 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 FSCN3Q9NQT6 498 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 DLL1O00548 723 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 CSN3P07498 182 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 IGFBP2P18065 325 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 ANOS1P23352 680 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 MIR17HGQ75NE6 70 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 TGFAP01135 160 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 WNT2P09544 360 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 DEFA4P12838 97 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 CD33P20138 364 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RPL15P61313 204 aaKnown RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RPL30P62888 115 aaKnown RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 TBR1Q16650 682 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 Q6ZWC4 215 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 NHLRC2Q8NBF2 726 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 OR13A1Q8NGR1 328 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 OR1B1Q8NGR6 318 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 HS3ST6Q96QI5 342 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 SSBP3Q9BWW4 388 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 RNASE7Q9H1E1 156 aaKnown RBP5.57□□□□□ -1.52
CPNE3-203ENST00000517490 DEPPQ9NTK1 212 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 CALYQ9NYX4 217 aa5.57□□□□□ -1.52
CPNE3-203ENST00000517490 OR4C46A6NHA9 309 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 C3orf80F5H4A9 247 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 MLNRO43193 412 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 HLA-DRB1P01911 266 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 OR9G9P0C7N8 305 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 B3GALT5-AS1P59052 145 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 HBBP68871 147 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 CLEC2AQ6UVW9 174 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 SSX8Q7RTT4 187 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 OR8B3Q8NGG8 313 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 PEF1Q9UBV8 284 aaKnown RBP5.56□□□□□ -1.52
CPNE3-203ENST00000517490 A0A1B0GUS0 222 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 A0A1W2PRE2 83 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 C21orf140B9A014 251 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 WNT9BO14905 357 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 GDF9O60383 454 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 MMP23AO75900 390 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 LIPFP07098 398 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 LMO1P25800 156 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 CX3CL1P78423 397 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 HARBI1Q96MB7 349 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 ZNF430Q9H8G1 570 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-203ENST00000517490 GP6Q9HCN6 339 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 MSRB2Q9Y3D2 182 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 SOX21Q9Y651 276 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-203ENST00000517490 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
CPNE3-203ENST00000517490 IQCF6A8MYZ5 107 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms