RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 MDS2Q8NDY4 140 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 BCL2L2Q92843 193 aaPredicted RBP8.03□□□□□ -1.12
VCAN-210ENST00000513960 PKIBQ9C010 78 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SS18L1O75177 396 aaPredicted RBP8.03□□□□□ -1.12
VCAN-210ENST00000513960 HBZP02008 142 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SSTR5P35346 364 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 RHOBP62745 196 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 MOB1BQ7L9L4 216 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 FAM122AQ96E09 287 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TAAR6Q96RI8 345 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SLC45A2Q9UMX9 530 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 POLDIP2Q9Y2S7 368 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 COL6A3P12111 3177 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 TMEM30CPA0ZSE6 113 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 NKX6-3A6NJ46 265 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 CDX4O14627 284 aaPredicted RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 WNT9BO14905 357 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 SNAI2O43623 268 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 GATA2P23769 480 aaPredicted RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 TSPOP30536 169 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 ATP1A1-AS1Q5TC04 95 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 ZNF645Q8N7E2 425 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 DCTN5Q9BTE1 182 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 SSBP4Q9BWG4 385 aaPredicted RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 A0A1W2PS18 150 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 NDUFB8O95169 186 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 ZNF83P51522 516 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 LYG1Q8N1E2 194 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 OR5B3Q8NH48 314 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 SEPSECSQ9HD40 501 aaKnown RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 CLEC5AQ9NY25 188 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 IBA57Q5T440 356 aaKnown RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 OR8B2Q96RD0 313 aa8.02□□□□□ -1.13
VCAN-210ENST00000513960 HEATR1Q9H583 2144 aaKnown RBP8.02□□□□□ -1.13
VCAN-210ENST00000513960 C12orf77C9JDV5 145 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 K7EN84 100 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 NUDT3O95989 172 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 HAND1O96004 215 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 CA2P00918 260 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 PSG7Q13046 419 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 Q8IYB0 196 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 OR2D3Q8NGH3 330 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 OR2T6Q8NHC8 308 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
VCAN-210ENST00000513960 COX11Q9Y6N1 276 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 ZNF318Q5VUA4 2279 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 DMDP11532 3685 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
VCAN-210ENST00000513960 LINC00310P59036 64 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 CENPVQ7Z7K6 275 aaPredicted RBP8.01□□□□□ -1.13
VCAN-210ENST00000513960 CLEC7AQ9BXN2 247 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 FREM2Q5SZK8 3169 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 TRBV6-6A0A0A6YYG2 114 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 TMPRSS2O15393 492 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 CSN3P07498 182 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 OR9G9P0C7N8 305 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 PSG1P11464 419 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 HOXC12P31275 282 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 LGALS4P56470 323 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 SCCPDHQ8NBX0 429 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 GMPPAQ96IJ6 420 aaPredicted RBP8.01□□□□□ -1.13
VCAN-210ENST00000513960 PMCHL2Q9BQD1 86 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 SPRR3Q9UBC9 169 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
VCAN-210ENST00000513960 ZNF137PP52743 207 aa8□□□□□ -1.13
VCAN-210ENST00000513960 RIPPLY3P57055 190 aa8□□□□□ -1.13
VCAN-210ENST00000513960 RBX1P62877 108 aa8□□□□□ -1.13
VCAN-210ENST00000513960 ZNF841Q6ZN19 808 aa8□□□□□ -1.13
VCAN-210ENST00000513960 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
VCAN-210ENST00000513960 GP6Q9HCN6 339 aa8□□□□□ -1.13
VCAN-210ENST00000513960 TPRP12270 2363 aaKnown RBP8□□□□□ -1.13
VCAN-210ENST00000513960 C15orf62A8K5M9 175 aa8□□□□□ -1.13
VCAN-210ENST00000513960 UQCRFS1P47985 274 aa8□□□□□ -1.13
VCAN-210ENST00000513960 RPL8P62917 257 aaKnown RBP8□□□□□ -1.13
VCAN-210ENST00000513960 GABRA6Q16445 453 aa8□□□□□ -1.13
VCAN-210ENST00000513960 MPV17L2Q567V2 206 aa8□□□□□ -1.13
VCAN-210ENST00000513960 TREML4Q6UXN2 200 aa8□□□□□ -1.13
VCAN-210ENST00000513960 ZC2HC1AQ96GY0 325 aa8□□□□□ -1.13
VCAN-210ENST00000513960 LYZL6O75951 148 aa8□□□□□ -1.13
VCAN-210ENST00000513960 IGLV2-14P01704 120 aa8□□□□□ -1.13
VCAN-210ENST00000513960 AMY1AP04745 511 aa8□□□□□ -1.13
VCAN-210ENST00000513960 RNFT1Q5M7Z0 435 aa8□□□□□ -1.13
VCAN-210ENST00000513960 MRPL52Q86TS9 123 aaKnown RBP8□□□□□ -1.13
VCAN-210ENST00000513960 CNEP1R1Q8N9A8 125 aa8□□□□□ -1.13
VCAN-210ENST00000513960 ZNF355PQ9NSJ1 428 aa8□□□□□ -1.13
VCAN-210ENST00000513960 WDFY4Q6ZS81 3184 aa8□□□□□ -1.13
VCAN-210ENST00000513960 SH2D7A6NKC9 451 aaPredicted RBP7.99□□□□□ -1.13
VCAN-210ENST00000513960 J3QW42 95 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 SPINT2O43291 252 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 MT-ND6P03923 174 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 CELA3BP08861 270 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 PRRX1P54821 245 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms