RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ATP6V0E1O15342 81 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 MED6O75586 246 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 TSPAN9O75954 239 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 NXPH3O95157 252 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 MBPP02686 304 aaPredicted RBP9.88□□□□□ -0.83
PDPN-210ENST00000513143 IGF1P05019 195 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 CRYBA1P05813 215 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 SLC35E3Q7Z769 313 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 SGMS2Q8NHU3 365 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 GRPEL2Q8TAA5 225 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 SRSF8Q9BRL6 282 aaKnown RBP9.88□□□□□ -0.83
PDPN-210ENST00000513143 FAM103A1Q9BTL3 118 aaKnown RBP9.88□□□□□ -0.83
PDPN-210ENST00000513143 RBKSQ9H477 322 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 ZNF580Q9UK33 172 aa9.88□□□□□ -0.83
PDPN-210ENST00000513143 A0A1W2PN81 502 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 IGLC7A0M8Q6 106 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 INS-IGF2F8WCM5 200 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 K7EPK0 472 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 SYNGR2O43760 224 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 SCGB1D2O95969 90 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 CHRNA7P36544 502 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 RAP2BP61225 183 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 CD83Q01151 205 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 RAB32Q13637 225 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 SPINK9Q5DT21 86 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 Q6ZSV7 163 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
PDPN-210ENST00000513143 OR10W1Q8NGF6 305 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 PPP1R1CQ8WVI7 109 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 HINT2Q9BX68 163 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 MAGT1Q9H0U3 335 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 PARP11Q9NR21 331 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 ZFP57Q9NU63 452 aa9.87□□□□□ -0.83
PDPN-210ENST00000513143 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 AP4M1O00189 453 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 PSMB6P28072 239 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 VDAC2P45880 294 aaPredicted RBP9.86□□□□□ -0.83
PDPN-210ENST00000513143 POLR2GP62487 172 aaKnown RBP eCLIP9.86□□□□□ -0.83
PDPN-210ENST00000513143 WT1-ASQ06250 92 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 AKIRIN2Q53H80 203 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 ASPHD1Q5U4P2 390 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 LFNGQ8NES3 379 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 DTD1Q8TEA8 209 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 ABHD5Q8WTS1 349 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 ST6GAL2Q96JF0 529 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 C16orf95Q9H693 158 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 PLEKHA3Q9HB20 300 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 RCL1Q9Y2P8 373 aaKnown RBP9.86□□□□□ -0.83
PDPN-210ENST00000513143 JMJD1CQ15652 2540 aa9.86□□□□□ -0.83
PDPN-210ENST00000513143 WRBO00258 174 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 CCNKO75909 580 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 NDUFA7O95182 113 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 LY86O95711 162 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 AREGP15514 252 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 HOXA1P49639 335 aaPredicted RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 S100A10P60903 97 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 SRSF2Q01130 221 aaKnown RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 TMEM267Q0VDI3 215 aaPredicted RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 C19orf54Q5BKX5 351 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 CIB3Q96Q77 187 aaPredicted RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 RAB40CQ96S21 281 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 HIPK2Q9H2X6 1198 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 C11orf1Q9H5F2 150 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 RANGRFQ9HD47 186 aaPredicted RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 ENY2Q9NPA8 101 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 LSM5Q9Y4Y9 91 aaKnown RBP9.85□□□□□ -0.83
PDPN-210ENST00000513143 C2CD3Q4AC94 2353 aa9.85□□□□□ -0.83
PDPN-210ENST00000513143 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 TRAV41A0A0B4J266 112 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 G3V318 75 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 H0YIZ8 118 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 SSSCA1O60232 199 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 DEDDO75618 318 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 MPC2O95563 127 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 CRYGCP07315 174 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 APELAP0DMC3 54 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 OR13C7P0DN81 318 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 CTRB1P17538 263 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 ERHP84090 104 aaKnown RBP9.84□□□□□ -0.83
PDPN-210ENST00000513143 FGL1Q08830 312 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 TMEM95Q3KNT9 176 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
PDPN-210ENST00000513143 CTRB2Q6GPI1 263 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 C11orf87Q6NUJ2 197 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 AKAP14Q86UN6 197 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 STPG2Q8N412 459 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 OR2T35Q8NGX2 323 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 OR2T6Q8NHC8 308 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 TAF15Q92804 592 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDPN-210ENST00000513143 SMIM8Q96KF7 97 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
PDPN-210ENST00000513143 RNF126Q9BV68 326 aa9.84□□□□□ -0.83
PDPN-210ENST00000513143 HEYLQ9NQ87 328 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms