RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 A0A1W2PPE3 182 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 C15orf61A6NNL5 157 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 LEUTXA8MZ59 168 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 WRBO00258 174 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 CHST1O43916 411 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 SPDEFO95238 335 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM50AO95807 157 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 CRYZL1O95825 349 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 ARG1P05089 322 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 UBE2KP61086 200 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 POLR2GP62487 172 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 RPL23AP62750 156 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM252Q8N6L7 170 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 OR5B3Q8NH48 314 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 SCARB1Q8WTV0 552 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 ST8SIA2Q92186 375 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 LHX4Q969G2 390 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 MRPL20Q9BYC9 149 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 PARD6GQ9BYG4 376 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM140Q9NV12 185 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 FKBP11Q9NYL4 201 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 UBQLN2Q9UHD9 624 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
PDLIM5-217ENST00000512274 WI2-2373I1.2A0A1W2PRP0 233 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 C3orf84H3BNL1 204 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 SCGB1D2O95969 90 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 IGLL1P15814 213 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 HTR1DP28221 377 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 CD1BP29016 333 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 IER3P46695 156 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 SULT1A1P50225 295 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 UBE2E1P51965 193 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 BPIFB3P59826 476 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 VAMP2P63027 116 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 EXOSC2Q13868 293 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 ZNF266Q14584 549 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 CLLU1Q5K131 121 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 CCDC144NLQ6NUI1 221 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM14EPQ6UXP3 125 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 BAP18Q8IXM2 172 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 PDZD9Q8IXQ8 264 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 OR8H1Q8NGG4 311 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM167AQ8TBQ9 72 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 FLYWCH2Q96CP2 140 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 ONECUT1Q9UBC0 465 aa8.34□□□□□ -1.07
PDLIM5-217ENST00000512274 COL7A1Q02388 2944 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 IGHV1-3A0A0C4DH29 117 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 A0A0U1RQK1 487 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 A0A1W2PPI3 338 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 UPK2O00526 184 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 SSSCA1O60232 199 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 TSPAN9O75954 239 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 IGHV3-7P01780 117 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 IGKV1-16P04430 117 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 OR9G9P0C7N8 305 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 LINC00205P59089 165 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 HSPE1P61604 102 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 ARF6P62330 175 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 EBI3Q14213 229 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 OR2B11Q5JQS5 317 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 TPTE2P1Q5T6R2 138 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 STX12Q86Y82 276 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 PNKDQ8N490 385 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 SLC25A32Q9H2D1 315 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 FBXL17Q9UF56 701 aa8.33□□□□□ -1.08
PDLIM5-217ENST00000512274 CENPVL3A0A0U1RRI6 287 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 IGSF23A1L1A6 192 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 SRRM4A7MD48 611 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 DFFBO76075 338 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 KBTBD11O94819 623 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 CRYGBP07316 175 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 MAS1LP35410 378 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 VDAC2P45880 294 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 RPP30P78346 268 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 ATP6V1FQ16864 119 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 VMO1Q7Z5L0 202 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 DTD1Q8TEA8 209 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 CFHR4Q92496 578 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 RPEQ96AT9 228 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 HARBI1Q96MB7 349 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 GINS3Q9BRX5 216 aa8.32□□□□□ -1.08
PDLIM5-217ENST00000512274 GGACTQ9BVM4 153 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms