RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 SPAG8Q99932 426 aaPredicted RBP11.71□□□□□ -0.53
RAB40C-202ENST00000509637 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 TMEM140Q9NV12 185 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 RHBDL2Q9NX52 303 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 UFC1Q9Y3C8 167 aa11.71□□□□□ -0.53
RAB40C-202ENST00000509637 DHFRP00374 187 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 SERPINE2P07093 398 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-202ENST00000509637 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 SDC2P34741 201 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 TAS2R31P59538 309 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 FXYD4P59646 89 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 MSMO1Q15800 293 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 SFXN4Q6P4A7 337 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 SPARTQ8N0X7 666 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 OR5B3Q8NH48 314 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 OR51H1Q8NH63 302 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
RAB40C-202ENST00000509637 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-202ENST00000509637 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 MEIS3P1A6NDR6 274 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 HPRT1P00492 218 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
RAB40C-202ENST00000509637 GNRHRP30968 328 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 IZUMO2Q6UXV1 221 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 GDPD1Q8N9F7 314 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
RAB40C-202ENST00000509637 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
RAB40C-202ENST00000509637 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 UBE2CO00762 179 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 CTSGP08311 255 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 NQO2P16083 231 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 APOC4P55056 127 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 MXD1Q05195 221 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 ZBTB34Q8NCN2 500 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 GIMAP1Q8WWP7 306 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 RNF2Q99496 336 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
RAB40C-202ENST00000509637 AUNIPQ9H7T9 357 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 PLEKHA2Q9HB19 425 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
RAB40C-202ENST00000509637 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
RAB40C-202ENST00000509637 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 SLC38A6Q8IZM9 456 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 FCAMRQ8WWV6 532 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 C20orf24Q9BUV8 137 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 DAZ1Q9NQZ3 744 aaKnown RBP11.67□□□□□ -0.54
RAB40C-202ENST00000509637 ETV7Q9Y603 341 aa11.67□□□□□ -0.54
RAB40C-202ENST00000509637 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
RAB40C-202ENST00000509637 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 K7EMT4 169 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 NDUFA4O00483 81 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 CHEK1O14757 476 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
RAB40C-202ENST00000509637 PSMB9P28065 219 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 LPAR6P43657 344 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 ARPC4P59998 168 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 TMEM17Q86X19 198 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 BSCL2Q96G97 398 aaPredicted RBP11.66□□□□□ -0.54
RAB40C-202ENST00000509637 C21orf62Q9NYP8 219 aa11.66□□□□□ -0.54
RAB40C-202ENST00000509637 AGRNO00468 2067 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 DEFB4AO15263 64 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 G6PCP35575 357 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 TGFBR1P36897 503 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 RFX2P48378 723 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 AADACL3Q5VUY0 350 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 OR5AP2Q8NGF4 316 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 CD300LFQ8TDQ1 290 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
RAB40C-202ENST00000509637 I3L2K1 104 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 APOHP02749 345 aaPredicted RBP11.64□□□□□ -0.55
RAB40C-202ENST00000509637 FGF2P09038 288 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 TFPI2P48307 235 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 GABARAPL2P60520 117 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 IDNKQ5T6J7 187 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 RHPN1-AS1Q9BWJ2 59 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
RAB40C-202ENST00000509637 COMMD9Q9P000 198 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms