RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 C19orf35Q6ZS72 473 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 PUSL1Q8N0Z8 303 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 KIR2DL5AQ8N109 375 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 OR2C3Q8N628 320 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 KIR2DL5BQ8NHK3 375 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 RNF183Q96D59 192 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 RAB3CQ96E17 227 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 FYTTD1Q96QD9 318 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 OR2A7Q96R45 310 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 MRPL27Q9P0M9 148 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 SELENOKQ9Y6D0 94 aa6.36□□□□□ -1.39
COL4A3BP-206ENST00000508809 IGKV1D-8A0A087WSZ0 117 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 TRBV7-1A0A0A6YYK4 115 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 FCGR3BO75015 233 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 ARL6IP5O75915 188 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 SLC22A5O76082 557 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 IGHV3-23P01764 117 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 HIST1H1BP16401 226 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 GNB3P16520 340 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 RPL27AP46776 148 aaKnown RBP6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 EIF4EBP1Q13541 118 aaPredicted RBP6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 ARFRP1Q13795 201 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 TRAM1Q15629 374 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 BTNL8Q6UX41 500 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 UNQ9165/PRO28630Q6UXU0 137 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 ZNF645Q8N7E2 425 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 OR1L6Q8NGR2 347 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 OR10R2Q8NGX6 335 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 VSTM2AQ8TAG5 236 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 TMEM167AQ8TBQ9 72 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 MAFIPQ8WZ33 124 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 UFD1Q92890 307 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 TMEM203Q969S6 136 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 EEF1AKMT3Q96AZ1 226 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 GINS4Q9BRT9 223 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 DCUN1D5Q9BTE7 237 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 PRELID3BQ9Y3B1 194 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 OR2W1Q9Y3N9 320 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 V9GY05 133 aa6.35□□□□□ -1.39
COL4A3BP-206ENST00000508809 IGLV11-55A0A075B6I3 123 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 DPPA5A6NC42 116 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 PRSS29PA6NIE9 313 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 PTGES3LE9PB15 166 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 TSPAN4O14817 238 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 DEDDO75618 318 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 KBTBD11O94819 623 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 DHFRP00374 187 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 CTXN2P0C2S0 81 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 AREGP15514 252 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 HIST1H1DP16402 221 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 DTYMKP23919 212 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 PSMA1P25786 263 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 RPS25P62851 125 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 MED22Q15528 200 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 ZNF585BQ52M93 769 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 RBPMS2Q6ZRY4 209 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 KCTD9Q7L273 389 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 SLC38A6Q8IZM9 456 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 TMEM217Q8N7C4 229 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 ZNF502Q8TBZ5 544 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 CXorf58Q96LI9 332 aa6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 ZNF436Q9C0F3 470 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 MRPS7Q9Y2R9 242 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 RBMX2Q9Y388 322 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-206ENST00000508809 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 MFSD2BA6NFX1 497 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 MYOD1P15172 320 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 GADD45AP24522 165 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 PTBP1P26599 531 aaKnown RBP eCLIP6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 ODF3L2Q3SX64 289 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 HES5Q5TA89 166 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 OR4S2Q8NH73 311 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 HSD17B10Q99714 261 aaKnown RBP6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 UFC1Q9Y3C8 167 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 S4R3C0 116 aa6.33□□□□□ -1.4
COL4A3BP-206ENST00000508809 HSPG2P98160 4391 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 TRAV1-2A0A0B4J238 106 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 IGKV1D-13A0A0B4J2D9 117 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 METTL21EPA6NDL7 271 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 J3QRK9 145 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 IGKV1-13P0DP09 117 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 DEFA4P12838 97 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 CD36P16671 472 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 HLA-GP17693 338 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 NFYAP23511 347 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 TALDO1P37837 337 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 RPL8P62917 257 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 FABP5Q01469 135 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 MLLT11Q13015 90 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 ARL6IP1Q15041 203 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 OR2B11Q5JQS5 317 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 OGFRL1Q5TC84 451 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
COL4A3BP-206ENST00000508809 CNIH2Q6PI25 160 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms