RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PRH1P02810 166 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 EIF4EP06730 217 aaKnown RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 CRYGBP07316 175 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 CTXN2P0C2S0 81 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 OR5H8P0DN80 308 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 MYOD1P15172 320 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 RPA2P15927 270 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ELK1P19419 428 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 EDN2P20800 178 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 PSMB8P28062 276 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 DUTP33316 252 aaKnown RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 CHRNA7P36544 502 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 BRWD1-AS2P59051 145 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TAS2R20P59543 309 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 FXYD4P59646 89 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ARPC4P59998 168 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 PITPNAQ00169 270 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 DEFA5Q01523 94 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ARL6IP1Q15041 203 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 RTL8BQ17RB0 113 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TIMM50Q3ZCQ8 353 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ACTBL2Q562R1 376 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 KPRPQ5T749 579 aaPredicted RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 FAM71F2Q6NXP2 309 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 Q6ZS49 121 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 HOGA1Q86XE5 327 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 PDPNQ86YL7 162 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 SNX29P2Q8IUI4 249 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 COMMD1Q8N668 190 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ZNF491Q8N8L2 437 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 BEST4Q8NFU0 473 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 OR13F1Q8NGS4 319 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TCTEX1D2Q8WW35 142 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 SNAPC3Q92966 411 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 SLC25A46Q96AG3 418 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 HARBI1Q96MB7 349 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 P2RX4Q99571 388 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 GON7Q9BXV9 100 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 SLC5A7Q9GZV3 580 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TOLLIPQ9H0E2 274 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 DCSTAMPQ9H295 470 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 RANGRFQ9HD47 186 aaPredicted RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 IFT46Q9NQC8 304 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 CCL28Q9NRJ3 127 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 NECAP2Q9NVZ3 263 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TAS2R8Q9NYW2 309 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 FOXA2Q9Y261 457 aaPredicted RBP3.49□□□□□ -1.85
NUP54-206ENST00000508465 VSIG4Q9Y279 399 aa3.49□□□□□ -1.85
NUP54-206ENST00000508465 TRAV34A0A0B4J273 112 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 FAM25AB3EWG3 89 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 FAM25CB3EWG5 89 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 FAM25GB3EWG6 89 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 SEC14L6B5MCN3 397 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 I3L521 148 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 K7EIL1 84 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 RAMP3O60896 148 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 SCGNO76038 276 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 TRGV3P03979 118 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 RRASP10301 218 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 HLA-DMAP28067 261 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 PRSS3P35030 304 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 LGALS7P47929 136 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 RORCP51449 518 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 TPPP2P59282 170 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 TMEM267Q0VDI3 215 aaPredicted RBP3.48□□□□□ -1.85
NUP54-206ENST00000508465 CBX3Q13185 183 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 EIF4EBP1Q13541 118 aaPredicted RBP3.48□□□□□ -1.85
NUP54-206ENST00000508465 SPCS2Q15005 226 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 CDK10Q15131 360 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 TNXAQ16473 311 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 CTF1Q16619 201 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 PRSS8Q16651 343 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 AKIRIN2Q53H80 203 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 UBE2NLQ5JXB2 153 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 TMEM69Q5SWH9 247 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 C10orf55Q5SWW7 151 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 C19orf35Q6ZS72 473 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 SSX9Q7RTT3 188 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 CROCCP3Q8IVE0 287 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 ZNF645Q8N7E2 425 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 OR11H1Q8NG94 326 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 OR5AP2Q8NGF4 316 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 MRAPQ8TCY5 172 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 MYOZ3Q8TDC0 251 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 C4orf3Q8WVX3 66 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 ACOT12Q8WYK0 555 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 DCUN1D4Q92564 292 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 ARPC1AQ92747 370 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 DLX4Q92988 240 aaPredicted RBP3.48□□□□□ -1.85
NUP54-206ENST00000508465 ADTRPQ96IZ2 230 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 UBE2E2Q96LR5 201 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 RNF5Q99942 180 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 ZNF430Q9H8G1 570 aaPredicted RBP3.48□□□□□ -1.85
NUP54-206ENST00000508465 EHFQ9NZC4 300 aa3.48□□□□□ -1.85
NUP54-206ENST00000508465 RBMX2Q9Y388 322 aaKnown RBP3.48□□□□□ -1.85
NUP54-206ENST00000508465 IGHV4OR15-8A0A075B7B6 117 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 A0A087WW49 117 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 A0A0A6YYH2 397 aa3.47□□□□□ -1.85
NUP54-206ENST00000508465 TRAV3A0A0B4J244 114 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms