RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 OR5M8Q8NGP6 311 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 OR1L8Q8NGR8 309 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 PHB2Q99623 299 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
TCOF1-210ENST00000506767 QTRT1Q9BXR0 403 aaKnown RBP10.04□□□□□ -0.8
TCOF1-210ENST00000506767 COA4Q9NYJ1 87 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 INMT-MINDY4F8WBC2 141 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 CRYGCP07315 174 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 HSPE1P61604 102 aaKnown RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 KLK9Q2XQG4 91 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 COQ8AQ8NI60 647 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 FAM110DQ8TAY7 271 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 MYOZ3Q8TDC0 251 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 FYTTD1Q96QD9 318 aaKnown RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 SEC22CQ9BRL7 303 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-210ENST00000506767 CACNG5Q9UF02 275 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 KLK9Q9UKQ9 250 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 TMED3Q9Y3Q3 217 aa10.03□□□□□ -0.8
TCOF1-210ENST00000506767 A0A1B0GU03 582 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 NPIPB5A8MRT5 1133 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 H3BUA1 57 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 ST8SIA3O43173 380 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 PRAF2O60831 178 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 PITX3O75364 302 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 APELAP0DMC3 54 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 SLC25A6P12236 298 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 AREGP15514 252 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 CTRB1P17538 263 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 PSMB6P28072 239 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 RAB9AP51151 201 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 PRCDQ00LT1 54 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 KIAA0141Q14154 515 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-210ENST00000506767 PDLIM3Q53GG5 364 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-210ENST00000506767 GGNBP1Q5YKI7 109 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 HIST2H2BDQ6DRA6 164 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 CTRB2Q6GPI1 263 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 HSD17B13Q7Z5P4 300 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-210ENST00000506767 C11orf44Q8N8P7 122 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 OR5T1Q8NG75 326 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 OR10W1Q8NGF6 305 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 OR52E5Q8NH55 327 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-210ENST00000506767 KLK15Q9H2R5 256 aa10.02□□□□□ -0.81
TCOF1-210ENST00000506767 INS-IGF2F8WCM5 200 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 RBMXL2O75526 392 aaKnown RBP10.01□□□□□ -0.81
TCOF1-210ENST00000506767 ADAP1O75689 374 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 RPLP1P05386 114 aaKnown RBP10.01□□□□□ -0.81
TCOF1-210ENST00000506767 HOXB5P09067 269 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 SULT1A3P0DMM9 295 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 SULT1A4P0DMN0 295 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 WT1-ASQ06250 92 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 SMCO1Q147U7 214 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 CXorf66Q5JRM2 361 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-210ENST00000506767 SLA2Q9H6Q3 261 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 ZFP57Q9NU63 452 aa10.01□□□□□ -0.81
TCOF1-210ENST00000506767 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-210ENST00000506767 TRBV9A0A0B4J1U6 114 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 SNRPGP15A8MWD9 76 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 DHFRP00374 187 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 PF4V1P10720 104 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 CDX1P47902 265 aaPredicted RBP10□□□□□ -0.81
TCOF1-210ENST00000506767 SPCS3P61009 180 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 RGS21Q2M5E4 152 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 LCNL1Q6ZST4 164 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 C12orf45Q8N5I9 185 aaPredicted RBP10□□□□□ -0.81
TCOF1-210ENST00000506767 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 HINT2Q9BX68 163 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 CACFD1Q9UGQ2 172 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 TENM1Q9UKZ4 2725 aa10□□□□□ -0.81
TCOF1-210ENST00000506767 ANK2Q01484 3957 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 MPTX1A8MV57 137 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 IFNA17P01571 189 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 REG1AP05451 166 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 OR13C7P0DN81 318 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 RPL23AP62750 156 aaKnown RBP9.99□□□□□ -0.81
TCOF1-210ENST00000506767 OXA1LQ15070 435 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 TMEM65Q6PI78 240 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 C19orf35Q6ZS72 473 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 UBE2E2Q96LR5 201 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 MS4A10Q96PG2 267 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 PDCD10Q9BUL8 212 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 GPN1Q9HCN4 374 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-210ENST00000506767 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
TCOF1-210ENST00000506767 IFNA21P01568 189 aa9.98□□□□□ -0.81
TCOF1-210ENST00000506767 PRH1P02810 166 aa9.98□□□□□ -0.81
TCOF1-210ENST00000506767 TRGV3P03979 118 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms