RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
SCLT1-208ENST00000506368 GUSBP11Q6P575 273 aa13.18□□□□□ -0.3
SCLT1-208ENST00000506368 OCIAD1Q9NX40 245 aa13.18□□□□□ -0.3
SCLT1-208ENST00000506368 UNC13CQ8NB66 2214 aa13.18□□□□□ -0.3
SCLT1-208ENST00000506368 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
SCLT1-208ENST00000506368 OR2J3O76001 311 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 IGLL1P15814 213 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 USF1P22415 310 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-208ENST00000506368 VDAC2P45880 294 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-208ENST00000506368 OR1C1Q15619 314 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 FAM231DQ6ZW35 169 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 DEFB125Q8N687 156 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 C5orf30Q96GV9 206 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 ZPBPQ9BS86 351 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
SCLT1-208ENST00000506368 M0R2Z0 102 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 RHBDL1O75783 438 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 COX6A1P12074 109 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 NTF3P20783 257 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 PPOXP50336 477 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 ARF6P62330 175 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 TRAT1Q6PIZ9 186 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 PQLC2Q6ZP29 291 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 YRDCQ86U90 279 aaKnown RBP13.17□□□□□ -0.3
SCLT1-208ENST00000506368 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 OR4A16Q8NH70 328 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 OR2V2Q96R30 315 aa13.17□□□□□ -0.3
SCLT1-208ENST00000506368 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-208ENST00000506368 C12orf77C9JDV5 145 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
SCLT1-208ENST00000506368 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
SCLT1-208ENST00000506368 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 TMEM70Q9BUB7 260 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 DUSP23Q9BVJ7 150 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 CBY3A6NI87 242 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 CA6P23280 308 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 FAM71F2Q6NXP2 309 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 ATP5L2Q7Z4Y8 100 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 FAM19A2Q8N3H0 131 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 PRRG4Q9BZD6 226 aa13.16□□□□□ -0.3
SCLT1-208ENST00000506368 A0A1W2PRE2 83 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 C2orf70A6NJV1 201 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 TAS2R45P59539 299 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 ERVK-16P61578 105 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 LDLRAD2Q5SZI1 272 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 ZNF596Q8TC21 504 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 TECRQ9NZ01 308 aaKnown RBP13.15□□□□□ -0.3
SCLT1-208ENST00000506368 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
SCLT1-208ENST00000506368 M0R1X1 148 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 TAX1BP3O14907 124 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 CD5LO43866 347 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 HBZP02008 142 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 ADH4P08319 380 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRR20EP86478 221 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRR20CP86479 221 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRR20DP86480 221 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRR20BP86481 221 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRR20AP86496 221 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 GABRA6Q16445 453 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRAMEF5Q5TYX0 476 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PRAMEF6Q5VXH4 476 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 CIDEAO60543 219 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 HAND1O96004 215 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 DUTP33316 252 aaKnown RBP13.14□□□□□ -0.31
SCLT1-208ENST00000506368 TNXAQ16473 311 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 SPOCK3Q9BQ16 436 aa13.14□□□□□ -0.31
SCLT1-208ENST00000506368 SPAARA0A1B0GVQ0 90 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 TM4SF5O14894 197 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 TNFSF15O95150 251 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 CGAP01215 116 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 CELA2AP08217 269 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 CCL2P13500 99 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 CRYBB3P26998 211 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 Q56UQ5 140 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
SCLT1-208ENST00000506368 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 DOLPP1Q86YN1 238 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
SCLT1-208ENST00000506368 IGF2BP2-AS1Q96M15 143 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
SCLT1-208ENST00000506368 MS4A6AQ9H2W1 248 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
SCLT1-208ENST00000506368 ARHGAP21Q5T5U3 1957 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 SPTBN2O15020 2390 aa13.13□□□□□ -0.31
SCLT1-208ENST00000506368 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-208ENST00000506368 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
SCLT1-208ENST00000506368 SPINK9Q5DT21 86 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms