RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SLC25A24Q6NUK1 477 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 IL34Q6ZMJ4 242 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 CCDC140Q96MF4 163 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 CCDC59Q9P031 241 aaKnown RBP10.86□□□□□ -0.67
HOXC9-202ENST00000504557 PEMTQ9UBM1 199 aa10.86□□□□□ -0.67
HOXC9-202ENST00000504557 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 DBX1A6NMT0 343 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 H3BMQ9 156 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 GABARAPH6UMI1 98 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 GGCTO75223 188 aaKnown RBP10.85□□□□□ -0.67
HOXC9-202ENST00000504557 GPR183P32249 361 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 IZUMO4Q1ZYL8 232 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 TMEM229BQ8NBD8 167 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 OR4A16Q8NH70 328 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 MARCH1Q8TCQ1 289 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
HOXC9-202ENST00000504557 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 FRMD6-AS1P0C7T7 363 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 SP6Q3SY56 376 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 SPINK9Q5DT21 86 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 OR13C8Q8NGS7 320 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 CACNG8Q8WXS5 425 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 LSM10Q969L4 123 aaKnown RBP10.84□□□□□ -0.67
HOXC9-202ENST00000504557 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 COPZ2Q9P299 210 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 PRNDQ9UKY0 176 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 DMRT1Q9Y5R6 373 aa10.84□□□□□ -0.67
HOXC9-202ENST00000504557 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 H0Y980 276 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 CLEC3BP05452 202 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 TBPP20226 339 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 AKR1C2P52895 323 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 LHFPL1Q86WI0 220 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 UBAC2Q8NBM4 344 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 TERB2Q8NHR7 220 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 RNASE11Q8TAA1 199 aaKnown RBP10.83□□□□□ -0.68
HOXC9-202ENST00000504557 SMIM4Q8WVI0 70 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 SEC22AQ96IW7 307 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 TSC22D3Q99576 134 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 BCL7BQ9BQE9 202 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 THYN1Q9P016 225 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
HOXC9-202ENST00000504557 TRBV7-1A0A0A6YYK4 115 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 C3orf85A0A1B0GTC6 90 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 C2orf70A6NJV1 201 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 CYB5BO43169 146 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 CD74P04233 296 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 CD300EQ496F6 205 aaPredicted RBP10.82□□□□□ -0.68
HOXC9-202ENST00000504557 FAM209BQ5JX69 171 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 SBSPONQ8IVN8 264 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 CCDC71LQ8N9Z2 235 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 OR4C16Q8NGL9 310 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
HOXC9-202ENST00000504557 TMEM56Q96MV1 263 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
HOXC9-202ENST00000504557 SLIRPQ9GZT3 109 aaKnown RBP10.82□□□□□ -0.68
HOXC9-202ENST00000504557 FKBP11Q9NYL4 201 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 C14orf166Q9Y224 244 aaKnown RBP10.82□□□□□ -0.68
HOXC9-202ENST00000504557 U3KQK5 164 aa10.82□□□□□ -0.68
HOXC9-202ENST00000504557 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 TPPPO94811 219 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 NHLRC4P0CG21 123 aaPredicted RBP10.81□□□□□ -0.68
HOXC9-202ENST00000504557 AKAIN1P0CW23 69 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 IGHV4-30-4P0DP06 118 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 FOLR2P14207 255 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 TNFSF8P32971 234 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 MFAP2P55001 183 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 RND3P61587 244 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 MRPS10P82664 201 aaKnown RBP10.81□□□□□ -0.68
HOXC9-202ENST00000504557 MEF2DQ14814 521 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 FAM106AQ4KMX7 169 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 THOC7Q6I9Y2 204 aaKnown RBP10.81□□□□□ -0.68
HOXC9-202ENST00000504557 PLET1Q6UQ28 207 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 ADAMTSL5Q6ZMM2 481 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 HSD17B13Q7Z5P4 300 aaPredicted RBP10.81□□□□□ -0.68
HOXC9-202ENST00000504557 GTSCR1Q86UQ5 136 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 SGPP2Q8IWX5 399 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 Q8N402 240 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 OR5B3Q8NH48 314 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 MISP3Q96FF7 219 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 TMEM14BQ9NUH8 114 aa10.81□□□□□ -0.68
HOXC9-202ENST00000504557 F11RQ9Y624 299 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms