RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 RNASEK-C17orf49H0YIS7 233 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 HBE1P02100 147 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 CD5P06127 495 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 CRYGBP07316 175 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 RAB2AP61019 212 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 AKR1C1Q04828 323 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 BSXQ3C1V8 233 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 C2orf83Q53S99 150 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 LDLRAD2Q5SZI1 272 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 ZNF709Q8N972 641 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 NPCDR1Q9BY65 106 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 RPRMQ9NS64 109 aa17.71■□□□□ 0.43
PTPN13-205ENST00000502971 DOPEY2Q9Y3R5 2298 aa17.7■□□□□ 0.42
PTPN13-205ENST00000502971 ERHP84090 104 aaKnown RBP17.7■□□□□ 0.42
PTPN13-205ENST00000502971 PSG5Q15238 335 aa17.7■□□□□ 0.42
PTPN13-205ENST00000502971 MMD2Q8IY49 270 aa17.7■□□□□ 0.42
PTPN13-205ENST00000502971 C10orf105Q8TEF2 133 aa17.7■□□□□ 0.42
PTPN13-205ENST00000502971 POLR3KQ9Y2Y1 108 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-205ENST00000502971 OOSP1A8MZH6 123 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 FNDC10F2Z333 226 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 SOX15O60248 233 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 MBP02144 154 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 HOXB4P17483 251 aaPredicted RBP17.69■□□□□ 0.42
PTPN13-205ENST00000502971 MAS1LP35410 378 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 ATP5J2P56134 94 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 MINOS1Q5TGZ0 78 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 SPSB3Q6PJ21 355 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 CLEC2AQ6UVW9 174 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 PBDC1Q9BVG4 233 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 MINOS1-NBL1R4GNA1 71 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 TRAV1-1A0A0B4J248 108 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 A0A1B0GW64 132 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 TIMM23O14925 209 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 COL8A1P27658 744 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 HABP2Q14520 560 aaPredicted RBP17.69■□□□□ 0.42
PTPN13-205ENST00000502971 PEA15Q15121 130 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 PRSS8Q16651 343 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 MRGPRG-AS1Q2M3A8 158 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 TMEM231Q9H6L2 316 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 VSIRQ9H7M9 311 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 NPVFQ9HCQ7 196 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 FAM96BQ9Y3D0 163 aa17.69■□□□□ 0.42
PTPN13-205ENST00000502971 SMCO3A2RU48 225 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 VWC2LB2RUY7 222 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 TOX4O94842 621 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 RNASE2P10153 161 aaKnown RBP17.68■□□□□ 0.42
PTPN13-205ENST00000502971 GUK1Q16774 197 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 CCDC144NLQ6NUI1 221 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 TREML4Q6UXN2 200 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 OR10W1Q8NGF6 305 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 SFT2D1Q8WV19 159 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 MBD3L1Q8WWY6 194 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 SIGLEC9Q9Y336 463 aa17.68■□□□□ 0.42
PTPN13-205ENST00000502971 VENTXO95231 258 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 PAX1P15863 534 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 ELLP55199 621 aaPredicted RBP17.67■□□□□ 0.42
PTPN13-205ENST00000502971 LHFPL4Q7Z7J7 247 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 MRPL41Q8IXM3 137 aaKnown RBP17.67■□□□□ 0.42
PTPN13-205ENST00000502971 CFHR4Q92496 578 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 TPSG1Q9NRR2 321 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 HILPDAQ9Y5L2 63 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 ARHGAP32A7KAX9 2087 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 CGB1A6NKQ9 187 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 E7EUB6 86 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 CNTFRP26992 372 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 SCRT1Q9BWW7 348 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 KIAA1456Q9P272 454 aa17.67■□□□□ 0.42
PTPN13-205ENST00000502971 LGALS4P56470 323 aa17.66■□□□□ 0.42
PTPN13-205ENST00000502971 FFAR4Q5NUL3 377 aa17.66■□□□□ 0.42
PTPN13-205ENST00000502971 C10orf91Q5T1B1 145 aa17.66■□□□□ 0.42
PTPN13-205ENST00000502971 ACSM6Q6P461 480 aa17.66■□□□□ 0.42
PTPN13-205ENST00000502971 METTL1Q9UBP6 276 aaKnown RBP17.66■□□□□ 0.42
PTPN13-205ENST00000502971 TBL2Q9Y4P3 447 aaKnown RBP17.66■□□□□ 0.42
PTPN13-205ENST00000502971 A0A1B0GV50 99 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 ACTL6BO94805 426 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 APOC3P02656 99 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 UBE2E1P51965 193 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 SUB1P53999 127 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPN13-205ENST00000502971 ARSJQ5FYB0 599 aaPredicted RBP17.65■□□□□ 0.42
PTPN13-205ENST00000502971 PPP1R27Q86WC6 154 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 RCC1LQ96I51 464 aaKnown RBP17.65■□□□□ 0.42
PTPN13-205ENST00000502971 TBX15Q96SF7 602 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 SEC11CQ9BY50 192 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 EIF5A2Q9GZV4 153 aaKnown RBP17.65■□□□□ 0.42
PTPN13-205ENST00000502971 SMDT1Q9H4I9 107 aa17.65■□□□□ 0.42
PTPN13-205ENST00000502971 A0A1W2PRD5 423 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 A0A1W2PRF3 423 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 A0A1W2PRM7 423 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 F8W036 122 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 OPRK1P41145 380 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 DSCR9P59020 149 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 CCL20P78556 96 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 HNF4GQ14541 408 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 ZNF726P1Q15940 193 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 C10orf55Q5SWW7 151 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 KCNIP2Q9NS61 270 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 LSM4Q9Y4Z0 139 aaKnown RBP17.64■□□□□ 0.41
PTPN13-205ENST00000502971 CRYBG3Q68DQ2 2970 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 FAM157AC9JC47 383 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 MOSP00540 346 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms