RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 TAS2R8Q9NYW2 309 aa11.28□□□□□ -0.6
HDAC6-236ENST00000498808 SLC22A5O76082 557 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 SSX1Q16384 188 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 TMEM203Q969S6 136 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
HDAC6-236ENST00000498808 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-236ENST00000498808 RAB22AQ9UL26 194 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 X6R8D5 127 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 AGRNO00468 2067 aa11.27□□□□□ -0.61
HDAC6-236ENST00000498808 IGLV2-18A0A075B6J9 118 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-236ENST00000498808 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 MIFP14174 115 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 SCARB1Q8WTV0 552 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 FKBP14Q9NWM8 211 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
HDAC6-236ENST00000498808 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
HDAC6-236ENST00000498808 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
HDAC6-236ENST00000498808 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 UPK2O00526 184 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 GADD45AP24522 165 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 TALDO1P37837 337 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 DEFB131AP59861 70 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 HES5Q5TA89 166 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 SLC25A24Q6NUK1 477 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 ZNF66Q6ZN08 573 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
HDAC6-236ENST00000498808 S100A14Q9HCY8 104 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 PLCXD1Q9NUJ7 323 aa11.25□□□□□ -0.61
HDAC6-236ENST00000498808 K7EIM0 57 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 SERPINE2P07093 398 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 CTSGP08311 255 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 DTYMKP23919 212 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 Q6ZRM9 215 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 BPIFB6Q8NFQ5 453 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 OR10C1Q96KK4 312 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 NDUFAF3Q9BU61 184 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 MND1Q9BWT6 205 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 COMMD5Q9GZQ3 224 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 V9GY05 133 aa11.24□□□□□ -0.61
HDAC6-236ENST00000498808 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
HDAC6-236ENST00000498808 CYB5BO43169 146 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 TNFSF12O43508 249 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 CTXN2P0C2S0 81 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 C4BPBP20851 252 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
HDAC6-236ENST00000498808 SPHARQ15513 63 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 Q56UQ5 140 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 SPAG16Q8N0X2 631 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 CMTM3Q96MX0 182 aa11.23□□□□□ -0.61
HDAC6-236ENST00000498808 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
HDAC6-236ENST00000498808 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 DFFBO76075 338 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 CD74P04233 296 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 GNAO1P09471 354 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
HDAC6-236ENST00000498808 STHQ8IWL8 128 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 GIMAP1Q8WWP7 306 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
HDAC6-236ENST00000498808 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDAC6-236ENST00000498808 ARL6IP5O75915 188 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 YIF1AO95070 293 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 IFNA10P01566 189 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.61
HDAC6-236ENST00000498808 TAS2R31P59538 309 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 THOC7Q6I9Y2 204 aaKnown RBP11.21□□□□□ -0.61
HDAC6-236ENST00000498808 ZNF773Q6PK81 442 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 Q8N1X5 172 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 DHRSXQ8N5I4 330 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 UFD1Q92890 307 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 DGCR14Q96DF8 476 aaKnown RBP11.21□□□□□ -0.61
HDAC6-236ENST00000498808 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 CCL28Q9NRJ3 127 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
HDAC6-236ENST00000498808 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms