RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PPP5CP53041 499 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 TMEM229BQ8NBD8 167 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 HINT2Q9BX68 163 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 NDUFA4L2Q9NRX3 87 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 SIGLEC8Q9NYZ4 499 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 PRNDQ9UKY0 176 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 OR51B2Q9Y5P1 312 aa13.99□□□□□ -0.17
HOXD11-202ENST00000498438 H0Y980 276 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 H3BMQ9 156 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 OR2C1O95371 312 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 IGKV1-39P01597 117 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 CD74P04233 296 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 IGKV1D-39P04432 117 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 OR13C7P0DN81 318 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 PI3P19957 117 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 TAS2R19P59542 299 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 RND3P61587 244 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
HOXD11-202ENST00000498438 GDPD1Q8N9F7 314 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 LSM10Q969L4 123 aaKnown RBP13.98□□□□□ -0.17
HOXD11-202ENST00000498438 ZNF486Q96H40 463 aaPredicted RBP13.98□□□□□ -0.17
HOXD11-202ENST00000498438 SEC22AQ96IW7 307 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 TSC22D3Q99576 134 aa13.98□□□□□ -0.17
HOXD11-202ENST00000498438 TRBV7-1A0A0A6YYK4 115 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 C15orf61A6NNL5 157 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 RAB3DO95716 219 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 SERPINE2P07093 398 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 PTBP1P26599 531 aaKnown RBP eCLIP13.97□□□□□ -0.17
HOXD11-202ENST00000498438 MRPS10P82664 201 aaKnown RBP13.97□□□□□ -0.17
HOXD11-202ENST00000498438 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
HOXD11-202ENST00000498438 ADAMTSL5Q6ZMM2 481 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 MRGPRFQ96AM1 343 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 DIRAS2Q96HU8 199 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 CXorf58Q96LI9 332 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 C6orf62Q9GZU0 229 aaPredicted RBP13.97□□□□□ -0.17
HOXD11-202ENST00000498438 TMEM14BQ9NUH8 114 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 STAB2Q8WWQ8 2551 aa13.97□□□□□ -0.17
HOXD11-202ENST00000498438 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 PIGPP57054 158 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 IL18Q14116 193 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 SCGB2B2Q4G0G5 96 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 LCN12Q6JVE5 192 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 Q8N402 240 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 OR5B3Q8NH48 314 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 ZNF502Q8TBZ5 544 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 FKBP11Q9NYL4 201 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 THYN1Q9P016 225 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 U3KQK5 164 aa13.96□□□□□ -0.17
HOXD11-202ENST00000498438 HUWE1Q7Z6Z7 4374 aaKnown RBP13.95□□□□□ -0.18
HOXD11-202ENST00000498438 IZUMO1RA6ND01 250 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 LGALS9O00182 355 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 CYB5BO43169 146 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 CLEC3BP05452 202 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 EDN2P20800 178 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 GPR183P32249 361 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 MECP2P51608 486 aaKnown RBP13.95□□□□□ -0.18
HOXD11-202ENST00000498438 FAAP20Q6NZ36 180 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 H2BFWTQ7Z2G1 175 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 GPHB5Q86YW7 130 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 Q8N1Y9 231 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 TERB2Q8NHR7 220 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 SLIRPQ9GZT3 109 aaKnown RBP13.95□□□□□ -0.18
HOXD11-202ENST00000498438 ZC4H2Q9NQZ6 224 aa13.95□□□□□ -0.18
HOXD11-202ENST00000498438 F11RQ9Y624 299 aaKnown RBP13.95□□□□□ -0.18
HOXD11-202ENST00000498438 C2orf70A6NJV1 201 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 MFAP2P55001 183 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 MEF2DQ14814 521 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 SLC25A24Q6NUK1 477 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 SBSPONQ8IVN8 264 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 OR2K2Q8NGT1 345 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 OR4A16Q8NH70 328 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 ZFAND1Q8TCF1 268 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 MARCH1Q8TCQ1 289 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 DYNLRB2Q8TF09 96 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 TMEM56Q96MV1 263 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 TP53RKQ96S44 253 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 THAP7Q9BT49 309 aaPredicted RBP13.94□□□□□ -0.18
HOXD11-202ENST00000498438 RABL2AQ9UBK7 228 aaPredicted RBP13.94□□□□□ -0.18
HOXD11-202ENST00000498438 RABL2BQ9UNT1 228 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 TENM3Q9P273 2699 aa13.94□□□□□ -0.18
HOXD11-202ENST00000498438 CTDSPLO15194 276 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 IGHV4-30-4P0DP06 118 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 FOLR2P14207 255 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 CD300EQ496F6 205 aaPredicted RBP13.93□□□□□ -0.18
HOXD11-202ENST00000498438 FAM106AQ4KMX7 169 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 COPZ2Q9P299 210 aa13.93□□□□□ -0.18
HOXD11-202ENST00000498438 IGHV3-21A0A0B4J1V1 117 aa13.92□□□□□ -0.18
HOXD11-202ENST00000498438 C3orf85A0A1B0GTC6 90 aa13.92□□□□□ -0.18
HOXD11-202ENST00000498438 ZNF320A2RRD8 509 aa13.92□□□□□ -0.18
HOXD11-202ENST00000498438 A8MWP6 167 aa13.92□□□□□ -0.18
HOXD11-202ENST00000498438 IZUMO4Q1ZYL8 232 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms