RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CHRDL1Q9BU40 450 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 NDUFAF3Q9BU61 184 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 C21orf62Q9NYP8 219 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 SMPXQ9UHP9 88 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 PSORS1C1Q9UIG5 152 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 ETV7Q9Y603 341 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 DEFB131BA0A096LNP1 70 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IGKV1D-13A0A0B4J2D9 117 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IGHV7-4-1A0A0J9YVY3 117 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 DNASE2O00115 360 aaPredicted RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 CHEK1O14757 476 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IFNA10P01566 189 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 HLA-DQB1P01920 261 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 AMBPP02760 352 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 EIF4EP06730 217 aaKnown RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 RBMY1A1P0DJD3 496 aaKnown RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 RBMY1CP0DJD4 496 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IGKV1-13P0DP09 117 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 MIFP14174 115 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 CALRP27797 417 aaKnown RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 IRF3Q14653 427 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 RBMY1FQ15415 496 aaKnown RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 ZNF767PQ75MW2 155 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 C8orf59Q8N0T1 100 aaPredicted RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 MFSD4AQ8N468 514 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 MAPKAPK5-AS1Q8N8E1 139 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 GDPD1Q8N9F7 314 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 QTRT1Q9BXR0 403 aaKnown RBP8.47□□□□□ -1.05
CDK9-205ENST00000498339 S100A14Q9HCY8 104 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 V9GY05 133 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 AGRNO00468 2067 aa8.47□□□□□ -1.05
CDK9-205ENST00000498339 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 CTXN2P0C2S0 81 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 OR13C7P0DN81 318 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 DEFB131AP59861 70 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.06
CDK9-205ENST00000498339 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
CDK9-205ENST00000498339 SPHARQ15513 63 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 ZNF66Q6ZN08 573 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 Q6ZS49 121 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 SPAG16Q8N0X2 631 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 DHRSXQ8N5I4 330 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 DMBX1Q8NFW5 382 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.06
CDK9-205ENST00000498339 HINT2Q9BX68 163 aa8.46□□□□□ -1.06
CDK9-205ENST00000498339 TRAV3A0A0B4J244 114 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 NUPL2O15504 423 aaKnown RBP8.45□□□□□ -1.06
CDK9-205ENST00000498339 IFNA21P01568 189 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 IFNA17P01571 189 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 HSMCR30P0CW71 290 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 DTYMKP23919 212 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 BRWD1-AS2P59051 145 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 RPS25P62851 125 aaKnown RBP8.45□□□□□ -1.06
CDK9-205ENST00000498339 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 SCARB1Q8WTV0 552 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 SECTM1Q8WVN6 248 aa8.45□□□□□ -1.06
CDK9-205ENST00000498339 ELF5Q9UKW6 265 aaPredicted RBP8.45□□□□□ -1.06
CDK9-205ENST00000498339 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
CDK9-205ENST00000498339 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 METTL21EPA6NDL7 271 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 SULT1C2O00338 296 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 UPK2O00526 184 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 SERPINE2P07093 398 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 NQO2P16083 231 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 TAS2R31P59538 309 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 CATR1Q13166 79 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
CDK9-205ENST00000498339 TRAM1Q15629 374 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 TMEM41BQ5BJD5 291 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 THOC7Q6I9Y2 204 aaKnown RBP8.44□□□□□ -1.06
CDK9-205ENST00000498339 ATG5Q9H1Y0 275 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 TMEM140Q9NV12 185 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 RABAC1Q9UI14 185 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 CELA1Q9UNI1 258 aa8.44□□□□□ -1.06
CDK9-205ENST00000498339 F11RQ9Y624 299 aaKnown RBP8.44□□□□□ -1.06
CDK9-205ENST00000498339 HERC1Q15751 4861 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 PTGES3LE9PB15 166 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 DFFBO76075 338 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 GNAO1P09471 354 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 ERVK-16P61578 105 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 ARL6IP1Q15041 203 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 LAIR2Q6ISS4 152 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 CNIH2Q6PI25 160 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 TMEM91Q6ZNR0 172 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 HSD17B13Q7Z5P4 300 aaPredicted RBP8.43□□□□□ -1.06
CDK9-205ENST00000498339 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms