RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 RP1L1Q8IWN7 2480 aaPredicted RBP0.68□□□□□ -2.3
RBM39-242ENST00000498280 C15orf53Q8NAA6 179 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 OR8B3Q8NGG8 313 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 C10orf105Q8TEF2 133 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 MBD3L1Q8WWY6 194 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 FAM96AQ9H5X1 160 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 EFCAB1Q9HAE3 211 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 CMTM6Q9NX76 183 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 IL36BQ9NZH7 164 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 RSL24D1Q9UHA3 163 aaKnown RBP0.68□□□□□ -2.3
RBM39-242ENST00000498280 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 GREB1Q4ZG55 1949 aa0.68□□□□□ -2.3
RBM39-242ENST00000498280 ZFHX2Q9C0A1 2572 aaPredicted RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 DCCP43146 1447 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 TRBV20OR9-2A0A075B6H5 130 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 TRBV10-2A0A0K0K1G8 114 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 TRAPPC13A5PLN9 417 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 SLC22A1O15245 554 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 NOS1APO75052 506 aaPredicted RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 TNNC2P02585 160 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 RPSAP08865 295 aaKnown RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 FGF6P10767 208 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 EIF2B2P49770 351 aaKnown RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 RAB5BP61020 215 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 SUPT4H1P63272 117 aaKnown RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 RPL18Q07020 188 aaKnown RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 PMAIP1Q13794 54 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 CDK5R1Q15078 307 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 ELOBQ15370 118 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 KISS1Q15726 138 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 GRK1Q15835 563 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 HIST2H3PS2Q5TEC6 136 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 TMEM86BQ8N661 226 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 ZNF439Q8NDP4 499 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 OPTNQ96CV9 577 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 RETNLBQ9BQ08 111 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 BAIAP2Q9UQB8 552 aa0.67□□□□□ -2.3
RBM39-242ENST00000498280 LSM5Q9Y4Y9 91 aaKnown RBP0.67□□□□□ -2.3
RBM39-242ENST00000498280 SDK1Q7Z5N4 2213 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 IGKV3OR2-268A0A0C4DH90 116 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 EEF1E1-BLOC1S5C9J1V9 151 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 KCNK1O00180 336 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 DCTN3O75935 186 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 IFNA5P01569 189 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 PRM2P04554 102 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 KRT7P08729 469 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 UBBP0CG47 229 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 RPS4Y1P22090 263 aaKnown RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 UNQ6190/PRO20217Q6UXQ8 127 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 DHFR2Q86XF0 187 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 Q8N2B8 174 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 SLC35B4Q969S0 331 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 ADAT1Q9BUB4 502 aaKnown RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 PARD6GQ9BYG4 376 aaPredicted RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 MRPS26Q9BYN8 205 aaKnown RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 WDR61Q9GZS3 305 aaKnown RBP0.66□□□□□ -2.3
RBM39-242ENST00000498280 CYSTM1Q9H1C7 97 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 TP73-AS1Q9UF72 201 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 GUCA1BQ9UMX6 200 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 PKIGQ9Y2B9 76 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 LHFPL6Q9Y693 200 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 SMARCA4P51532 1647 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 MYH11P35749 1972 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 MAP3K5Q99683 1374 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 MED13Q9UHV7 2174 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 GLI3P10071 1580 aa0.66□□□□□ -2.3
RBM39-242ENST00000498280 MAST2Q6P0Q8 1798 aa0.65□□□□□ -2.3
RBM39-242ENST00000498280 SETD5Q9C0A6 1442 aa0.65□□□□□ -2.3
RBM39-242ENST00000498280 RALGAPA2Q2PPJ7 1873 aa0.65□□□□□ -2.3
RBM39-242ENST00000498280 IGKV1D-43A0A0B4J1Z2 117 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 A0A1B0GV50 99 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 TMEM212A6NML5 194 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 FABP5P3A8MUU1 101 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 F8W036 122 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 SDCBPO00560 298 aaPredicted RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 PMP2P02689 132 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 C1QAP02745 245 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 CLPSP04118 112 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 OR5G3P0C626 314 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 ARL14EPLP0DKL9 152 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 HIST1H1EP10412 219 aaKnown RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 FXYD2P54710 66 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 SPCS3P61009 180 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 MAGOHP61326 146 aaKnown RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 CCL20P78556 96 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 IFITM2Q01629 132 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 OR2F1Q13607 317 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 ZNF345Q14585 488 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 SURF2Q15527 256 aaPredicted RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 IBA57Q5T440 356 aaKnown RBP0.65□□□□□ -2.31
RBM39-242ENST00000498280 AADACL3Q5VUY0 350 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 SYPL2Q5VXT5 272 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 LPCAT4Q643R3 524 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 Q6ZS49 121 aa0.65□□□□□ -2.31
RBM39-242ENST00000498280 RPS19BP1Q86WX3 136 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms