RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
CUX1-210ENST00000497815 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 PDCD10Q9BUL8 212 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
CUX1-210ENST00000497815 ZNF355PQ9NSJ1 428 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 FKBP11Q9NYL4 201 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 TMED3Q9Y3Q3 217 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 CCSO14618 274 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 SOX15O60248 233 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 PRAF2O60831 178 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 FBXO24O75426 580 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 IFNA21P01568 189 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 FGF2P09038 288 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 PF4V1P10720 104 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 PPIFP30405 207 aaKnown RBP9.32□□□□□ -0.92
CUX1-210ENST00000497815 HSPE1P61604 102 aaKnown RBP9.32□□□□□ -0.92
CUX1-210ENST00000497815 SMCO1Q147U7 214 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 C19orf54Q5BKX5 351 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 THOC7Q6I9Y2 204 aaKnown RBP9.32□□□□□ -0.92
CUX1-210ENST00000497815 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 C19orf35Q6ZS72 473 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 MINDY2Q8NBR6 621 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 OR1S1Q8NH92 325 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 MS4A10Q96PG2 267 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 ZNF580Q9UK33 172 aa9.32□□□□□ -0.92
CUX1-210ENST00000497815 A0A1B0GU03 582 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 C13orf42A0A1B0GVH6 325 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 IGLC7A0M8Q6 106 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 FAM25EA8MYX2 175 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 IGHG4P01861 327 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 PRH1P02810 166 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 TATDN3Q17R31 274 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 KRTAP21-3Q3LHN1 58 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 TMEM65Q6PI78 240 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 ZNF429Q86V71 674 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 WIPF2Q8TF74 440 aaPredicted RBP9.31□□□□□ -0.92
CUX1-210ENST00000497815 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 PLEKHA3Q9HB20 300 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
CUX1-210ENST00000497815 ATRQ13535 2644 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 SNRPGP15A8MWD9 76 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 SSNA1O43805 119 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 IGLV1-40P01703 118 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 RPLP1P05386 114 aaKnown RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 OR13C7P0DN81 318 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 PSMB6P28072 239 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 HOXA1P49639 335 aaPredicted RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 DEFA5Q01523 94 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 WT1-ASQ06250 92 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 FOXE3Q13461 319 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 OXA1LQ15070 435 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 IAH1Q2TAA2 248 aaPredicted RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 CXorf66Q5JRM2 361 aaPredicted RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 COMMD1Q8N668 190 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 TMEM68Q96MH6 324 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 CITED2Q99967 270 aaPredicted RBP9.3□□□□□ -0.92
CUX1-210ENST00000497815 ZNF747Q9BV97 191 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 ENY2Q9NPA8 101 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 ALG5Q9Y673 324 aa9.3□□□□□ -0.92
CUX1-210ENST00000497815 C5orf51A6NDU8 294 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 GOSR2O14653 212 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 TRGV3P03979 118 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 ELANEP08246 267 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 DEFA4P12838 97 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 PSMB8P28062 276 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 TPPP2P59282 170 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 SPCS3P61009 180 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 C11orf87Q6NUJ2 197 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 HSD17B13Q7Z5P4 300 aaPredicted RBP9.29□□□□□ -0.92
CUX1-210ENST00000497815 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 CITED1Q99966 193 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 SRSF8Q9BRL6 282 aaKnown RBP9.29□□□□□ -0.92
CUX1-210ENST00000497815 GSKIPQ9P0R6 139 aa9.29□□□□□ -0.92
CUX1-210ENST00000497815 C7orf66A4D0T2 115 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 NPIPB5A8MRT5 1133 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 PITX3O75364 302 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 SIX6O95475 246 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 SCGB1D2O95969 90 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 SLC25A6P12236 298 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 CTRB1P17538 263 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 RAB9AP51151 201 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 TNFRSF9Q07011 255 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 NSUN5P1Q3KNT7 163 aa9.28□□□□□ -0.92
CUX1-210ENST00000497815 AARDQ4LEZ3 155 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms