RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	DNAH5	Q8TE73	4624 aa		4.1	□□□□□ -1.75
UBE3C-208	ENST00000497368	PCLO	Q9Y6V0	5065 aa		4.1	□□□□□ -1.75
UBE3C-208	ENST00000497368	RYR1	P21817	5038 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	PDCD5	O14737	125 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	TNFSF12	O43508	249 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	CNIH1	O95406	144 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	FCER2	P06734	321 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	RRAS	P10301	218 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	LYL1	P12980	280 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	FOLR2	P14207	255 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	MYL9	P24844	172 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	PSMB9	P28065	219 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	PSMB6	P28072	239 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	RPL27A	P46776	148 aa	Known RBP	4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	OR2B8P	P59922	312 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	CD81	P60033	236 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	MXD1	Q05195	221 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	WT1-AS	Q06250	92 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ARFRP1	Q13795	201 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	RTL8B	Q17RB0	113 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	RPEL1	Q2QD12	228 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	VMA21	Q3ZAQ7	101 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	OR4A47	Q6IF82	309 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	CNIH2	Q6PI25	160 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ZNF818P	Q6ZRF7	136 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	HOGA1	Q86XE5	327 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ANKRD13B	Q86YJ7	626 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	SGPP2	Q8IWX5	399 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	MMD2	Q8IY49	270 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368		Q8N402	240 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	OR13F1	Q8NGS4	319 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	USMG5	Q96IX5	58 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ADTRP	Q96IZ2	230 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	TMEM68	Q96MH6	324 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	FYTTD1	Q96QD9	318 aa	Known RBP	4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	NEURL2	Q9BR09	285 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	GINS4	Q9BRT9	223 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	AUNIP	Q9H7T9	357 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ZNF355P	Q9NSJ1	428 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	BET1L	Q9NYM9	111 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	TAS2R8	Q9NYW2	309 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	DAPK2	Q9UIK4	370 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	ZNF257	Q9Y2Q1	563 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	RRP15	Q9Y3B9	282 aa	Known RBP	4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368	CEPT1	Q9Y6K0	416 aa		4.09	□□□□□ -1.75
UBE3C-208	ENST00000497368		A0A0G2JLM5	398 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	MEIS3P1	A6NDR6	274 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	LGALS9	O00182	355 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	MRPS14	O60783	128 aa	Known RBP	4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR2C1	O95371	312 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	PPY	P01298	95 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	IGKV1-39	P01597	117 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	IGKV1D-39	P04432	117 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	C8orf88	P0DMB2	117 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	KIR2DS2	P43631	304 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	HSPA13	P48723	471 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	UCP3	P55916	312 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	MSMO1	Q15800	293 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ODF3L2	Q3SX64	289 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF585B	Q52M93	769 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	LCN12	Q6JVE5	192 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	BTNL8	Q6UX41	500 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	CLEC19A	Q6UXS0	136 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	SSX9	Q7RTT3	188 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ABCA13	Q86UQ4	5058 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	NECAP1	Q8NC96	275 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZBTB34	Q8NCN2	500 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	BEST4	Q8NFU0	473 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR10W1	Q8NGF6	305 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR2K2	Q8NGT1	345 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR4S2	Q8NH73	311 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF502	Q8TBZ5	544 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	TCTEX1D2	Q8WW35	142 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ISOC1	Q96CN7	298 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	YIPF6	Q96EC8	236 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR2A7	Q96R45	310 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	PHB2	Q99623	299 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ST6GALNAC5	Q9BVH7	336 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ELOVL1	Q9BW60	279 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	DCSTAMP	Q9H295	470 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	SRD5A3	Q9H8P0	318 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	SLC2A9	Q9NRM0	540 aa		4.08	□□□□□ -1.76
UBE3C-208	ENST00000497368	APOB	P04114	4563 aa	Known RBP	4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	LRP1B	Q9NZR2	4599 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	HSPG2	P98160	4391 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	TRAV18	A0A075B6X5	111 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	IGHV3-35	A0A0C4DH35	117 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368		K7EIM0	57 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	SULT1C2	O00338	296 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	UPK2	O00526	184 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	NXPH3	O95157	252 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	EIF4E	P06730	217 aa	Known RBP	4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	RPA2	P15927	270 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	CD36	P16671	472 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	HLA-G	P17693	338 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	GNRHR	P30968	328 aa		4.07	□□□□□ -1.76
UBE3C-208	ENST00000497368	FCGR2C	P31995	323 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms