RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 C2orf83Q53S99 150 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 TMEM14EPQ6UXP3 125 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 ZNF841Q6ZN19 808 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 GPR61Q9BZJ8 451 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 CTXND1A0A1B0GTU2 59 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 BMI1P35226 326 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 CDC34P49427 236 aaPredicted RBP6.81□□□□□ -1.32
USP54-215ENST00000497106 ZNF134P52741 427 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 DLX6P56179 175 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 DEFA5Q01523 94 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 FXYD3Q14802 87 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 FAM74A1Q5RGS3 127 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 WDR61Q9GZS3 305 aaKnown RBP6.81□□□□□ -1.32
USP54-215ENST00000497106 DIDO1Q9BTC0 2240 aaKnown RBP6.81□□□□□ -1.32
USP54-215ENST00000497106 MSGN1A6NI15 193 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 F6UZH7 168 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 IZUMO4Q1ZYL8 232 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 SLC16A13Q7RTY0 426 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 SVBPQ8N300 66 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 STXBP6Q8NFX7 210 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 OR10G9Q8NGN4 311 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 OR10G7Q8NGN6 311 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 ZNF430Q9H8G1 570 aaPredicted RBP6.81□□□□□ -1.32
USP54-215ENST00000497106 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 SZT2Q5T011 3432 aa6.81□□□□□ -1.32
USP54-215ENST00000497106 TGFAP01135 160 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 IGKV1-39P01597 117 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OPN1MWP04001 364 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 IGKV1D-39P04432 117 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OPN1MW2P0DN77 364 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OPN1MW3P0DN78 364 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 Q5PR19 223 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 DDB2Q92466 427 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OR4C12Q96R67 309 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TMEM14BQ9NUH8 114 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TEX50A0A1B0GTY4 177 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 CA2P00918 260 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 CEBPGP53567 150 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OR5R1Q8NH85 324 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 ARPC1AQ92747 370 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 MMP23AO75900 390 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 OR4P4Q8NGL7 312 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 P2RX4Q99571 388 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TXNDC17Q9BRA2 123 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 FBXL15Q9H469 300 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TMEM167BQ9NRX6 74 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 HIF1ANQ9NWT6 349 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 MOB4Q9Y3A3 225 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 SPP1P10451 314 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 Q56UQ5 140 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 C16orf54Q6UWD8 224 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 PRSS57Q6UWY2 283 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TCF23Q7RTU1 214 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 ARV1Q9H2C2 271 aa6.8□□□□□ -1.32
USP54-215ENST00000497106 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
USP54-215ENST00000497106 AGPAT2O15120 278 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 LINC00052Q96N35 136 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 A0A0G2JRQ6 117 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 M0R036 132 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 VENTXO95231 258 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
USP54-215ENST00000497106 RNF212Q495C1 297 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 SPNS3Q6ZMD2 512 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 CADP27708 2225 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 TRAV40A0A0B4J280 105 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 A0A1B0GV90 55 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 IGLV2-14P01704 120 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 NMBP08949 121 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 SRSF12Q8WXF0 261 aaKnown RBP6.79□□□□□ -1.32
USP54-215ENST00000497106 MRPL32Q9BYC8 188 aaKnown RBP6.79□□□□□ -1.32
USP54-215ENST00000497106 SIGLEC9Q9Y336 463 aa6.79□□□□□ -1.32
USP54-215ENST00000497106 IGLV1-47P01700 117 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 CRYBA1P05813 215 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 SLC35B1P78383 322 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 KLRD1Q13241 179 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 EIF4EBP1Q13541 118 aaPredicted RBP6.78□□□□□ -1.32
USP54-215ENST00000497106 RHEBQ15382 184 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 C5orf64Q2M2E5 130 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 SAPCD1Q5SSQ6 148 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 LCN15Q6UWW0 184 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 TMUB1Q9BVT8 246 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 DYSFO75923 2080 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 GNG7O60262 68 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 APOC3P02656 99 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 PLA2G2AP14555 144 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 MFAP4P55083 255 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 CLEC9AQ6UXN8 241 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 OR1P1Q8NH06 330 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 EAF1Q96JC9 268 aaPredicted RBP6.78□□□□□ -1.32
USP54-215ENST00000497106 SLC25A33Q9BSK2 321 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 PXMP4Q9Y6I8 212 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 A0A1B0GV50 99 aa6.78□□□□□ -1.32
USP54-215ENST00000497106 FAM157AC9JC47 383 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms