RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-216	ENST00000496738	C15orf54	Q8N8G6	183 aa		13.62	□□□□□ -0.23
LMNA-216	ENST00000496738	CSMD1	Q96PZ7	3565 aa		13.62	□□□□□ -0.23
LMNA-216	ENST00000496738	HRAS	P01112	189 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	IAPP	P10997	89 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	LYL1	P12980	280 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	CEACAM3	P40198	252 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	UBE2E1	P51965	193 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	CLEC9A	Q6UXN8	241 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	WFDC11	Q8NEX6	87 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	RAB24	Q969Q5	203 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	C7orf69	Q9H7B7	122 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	GOLT1B	Q9Y3E0	138 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	TRAV40	A0A0B4J280	105 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	CENPVL3	A0A0U1RRI6	287 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	CHST1	O43916	411 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	SAA1	P0DJI8	122 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	LOXL1	Q08397	574 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	OR4A16	Q8NH70	328 aa		13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-216	ENST00000496738	KANTR	A0A1W2PQU2	76 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	CIDEA	O60543	219 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	MYOD1	P15172	320 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	MC5R	P33032	325 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	SAA4	P35542	130 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	RELB	Q01201	579 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	USF2	Q15853	346 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	TMEM177	Q53S58	311 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	LINC01356	Q8N9X3	169 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	OR4C13	Q8NGP0	309 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738		H3BP45	60 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	TMEM50A	O95807	157 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	CNTFR	P26992	372 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	OSR1	Q8TAX0	266 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	ZDHHC16	Q969W1	377 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	RBKS	Q9H477	322 aa		13.6	□□□□□ -0.23
LMNA-216	ENST00000496738	FASN	P49327	2511 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-216	ENST00000496738		E5RGE8	158 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	SPDEF	O95238	335 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	TGFA	P01135	160 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	CAV2	P51636	162 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	VAMP2	P63027	116 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	GAGE1	Q13065	139 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	BRD3OS	Q6XYD6	125 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	PIP4P2	Q8N4L2	257 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	BCL2L11	O43521	198 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	SYNGR2	O43760	224 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	OPN1MW	P04001	364 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	OPN1MW2	P0DN77	364 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	OPN1MW3	P0DN78	364 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	HKR1	P10072	659 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	CD81	P60033	236 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	HNF4G	Q14541	408 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	FBLN7	Q53RD9	439 aa		13.59	□□□□□ -0.23
LMNA-216	ENST00000496738	SVEP1	Q4LDE5	3571 aa		13.58	□□□□□ -0.23
LMNA-216	ENST00000496738	FAM24A	A6NFZ4	105 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	NPFF	O15130	113 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	AVP	P01185	164 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	RPL12	P30050	165 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	BLOC1S1	P78537	153 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	HIST1H2BA	Q96A08	127 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	C11orf1	Q9H5F2	150 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	HSPB7	Q9UBY9	170 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	HECTD1	Q9ULT8	2610 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	CR1	P17927	2039 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	SLC25A17	O43808	307 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	IFNA17	P01571	189 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	IGLV2-23	P01705	113 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	IGHV4-31	P0DP07	118 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	IGHV4-38-2	P0DP08	117 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	UBE2K	P61086	200 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	TMEM249	Q2WGJ8	235 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	PRSS57	Q6UWY2	283 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	CFHR4	Q92496	578 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	C1orf159	Q96HA4	380 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	ZNF471	Q9BX82	626 aa	Predicted RBP	13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	TPSG1	Q9NRR2	321 aa		13.58	□□□□□ -0.24
LMNA-216	ENST00000496738	DLEU1	O43261	78 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	VENTX	O95231	258 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	IGKV1D-33	P01593	117 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	IGKV1-33	P01594	117 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	PAX9	P55771	341 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	CLINT1	Q14677	625 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	POU2AF1	Q16633	256 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	MINOS1	Q5TGZ0	78 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	CFAP161	Q6P656	301 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	AJUBA	Q96IF1	538 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	SMCO4	Q9NRQ5	59 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	MINOS1-NBL1	R4GNA1	71 aa		13.57	□□□□□ -0.24
LMNA-216	ENST00000496738	CEBPZOS	A8MTT3	80 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	ZNF25	P17030	456 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	HES1	Q14469	280 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	CIART	Q8N365	385 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	AQP10	Q96PS8	301 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	SEC11C	Q9BY50	192 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	SMIM3	Q9BZL3	60 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	TBL2	Q9Y4P3	447 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	SOX21	Q9Y651	276 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	PDZD2	O15018	2839 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	UNC79	Q9P2D8	2635 aa		13.56	□□□□□ -0.24
LMNA-216	ENST00000496738	IGHV1-69D	A0A0B4J2H0	117 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms