RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 DISC1C4P0D8 188 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 ATG12O94817 140 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 PTBP1P26599 531 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC4-211ENST00000494800 PPP5CP53041 499 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 PIGPP57054 158 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 OR5B3Q8NH48 314 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 OR4A16Q8NH70 328 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 LSM10Q969L4 123 aaKnown RBP13.51□□□□□ -0.25
HDAC4-211ENST00000494800 TMEM56Q96MV1 263 aa13.51□□□□□ -0.25
HDAC4-211ENST00000494800 SLIRPQ9GZT3 109 aaKnown RBP13.51□□□□□ -0.25
HDAC4-211ENST00000494800 IGLV11-55A0A075B6I3 123 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 TRBV7-1A0A0A6YYK4 115 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 CGB1A6NKQ9 187 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 H0Y980 276 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 BMPR1BO00238 502 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 GGCTO75223 188 aaKnown RBP13.5□□□□□ -0.25
HDAC4-211ENST00000494800 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 OR13C7P0DN81 318 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 SPNP16150 400 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
HDAC4-211ENST00000494800 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 OR4D10Q8NGI6 311 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 FANCD2OSQ96PS1 177 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 CEPT1Q9Y6K0 416 aa13.5□□□□□ -0.25
HDAC4-211ENST00000494800 TNCP24821 2201 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 FABP12A6NFH5 140 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 C15orf61A6NNL5 157 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 B3GALNT1O75752 331 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 NDUFB8O95169 186 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 IGLV1-51P01701 117 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 GP9P14770 177 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 PI3P19957 117 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 ARL3P36405 182 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 GDPD1Q8N9F7 314 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 OR1L6Q8NGR2 347 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 NDUFA4L2Q9NRX3 87 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
HDAC4-211ENST00000494800 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 LSM4Q9Y4Z0 139 aaKnown RBP13.49□□□□□ -0.25
HDAC4-211ENST00000494800 SMAD5-AS1Q9Y6J3 95 aa13.49□□□□□ -0.25
HDAC4-211ENST00000494800 C3orf85A0A1B0GTC6 90 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 GSTZ1O43708 216 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-211ENST00000494800 S100A5P33763 92 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 TRIM16LQ309B1 348 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 OR13C8Q8NGS7 320 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 SEC22AQ96IW7 307 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 PRRT1Q99946 306 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 NXF2Q9GZY0 626 aaKnown RBP13.48□□□□□ -0.25
HDAC4-211ENST00000494800 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
HDAC4-211ENST00000494800 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 IGHV3-23P01764 117 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-211ENST00000494800 TNFSF8P32971 234 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 AKR1C2P52895 323 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 SURF2Q15527 256 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-211ENST00000494800 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 SLC25A24Q6NUK1 477 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 MARCH1Q8TCQ1 289 aa13.47□□□□□ -0.25
HDAC4-211ENST00000494800 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-211ENST00000494800 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
HDAC4-211ENST00000494800 FAAP20Q6NZ36 180 aa13.46□□□□□ -0.25
HDAC4-211ENST00000494800 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.25
HDAC4-211ENST00000494800 CCDC140Q96MF4 163 aa13.46□□□□□ -0.25
HDAC4-211ENST00000494800 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.25
HDAC4-211ENST00000494800 F11RQ9Y624 299 aaKnown RBP13.46□□□□□ -0.25
HDAC4-211ENST00000494800 S4R3C0 116 aa13.46□□□□□ -0.25
HDAC4-211ENST00000494800 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-211ENST00000494800 ANKRD20A5PA0PJZ0 165 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 ZNF701M0R085 212 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-211ENST00000494800 LGALS9O00182 355 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 OR2C1O95371 312 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 CLEC3BP05452 202 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 CSN3P07498 182 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 IL34Q6ZMJ4 242 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 HAPLN4Q86UW8 402 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 GPHB5Q86YW7 130 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 Q8N402 240 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 OR2K2Q8NGT1 345 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 VN1R17PQ8TDU5 208 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 RRNAD1Q96FB5 475 aaKnown RBP13.45□□□□□ -0.26
HDAC4-211ENST00000494800 SCGB3A2Q96PL1 93 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 PDCD10Q9BUL8 212 aa13.45□□□□□ -0.26
HDAC4-211ENST00000494800 MFSD2BA6NFX1 497 aa13.44□□□□□ -0.26
HDAC4-211ENST00000494800 HLA-AP01891 365 aaKnown RBP13.44□□□□□ -0.26
HDAC4-211ENST00000494800 FAUP35544 74 aaKnown RBP13.44□□□□□ -0.26
HDAC4-211ENST00000494800 AP3S2P59780 193 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms