RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 FCGR2BP31994 310 aaPredicted RBP7.15□□□□□ -1.26
UBR4-216ENST00000494503 ELLP55199 621 aaPredicted RBP7.15□□□□□ -1.26
UBR4-216ENST00000494503 BRWD1-AS2P59051 145 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 TAS2R31P59538 309 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 HERV-K104P61576 105 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 MXD1Q05195 221 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 IZUMO2Q6UXV1 221 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 APRG1Q8IVJ8 170 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 NRG4Q8WWG1 115 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 TMEM190Q8WZ59 177 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 VCX3BQ9H321 246 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 RHBDL2Q9NX52 303 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 TSPAN4O14817 238 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 RLN1P04808 185 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 IFNA4P05014 189 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 CTSDP07339 412 aaPredicted RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 TRAPPC2P0DI81 140 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 TRAPPC2BP0DI82 140 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 ODF3L2Q3SX64 289 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 IDNKQ5T6J7 187 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 SFXN4Q6P4A7 337 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 GDPD1Q8N9F7 314 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 CD300LFQ8TDQ1 290 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 VN1R17PQ8TDU5 208 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 RNF183Q96D59 192 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 BSCL2Q96G97 398 aaPredicted RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 CMTM3Q96MX0 182 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 ZNF436Q9C0F3 470 aaPredicted RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 IFT46Q9NQC8 304 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 TXNL4BQ9NX01 149 aaKnown RBP7.14□□□□□ -1.27
UBR4-216ENST00000494503 C21orf62Q9NYP8 219 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 SSR3Q9UNL2 185 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 NSG2Q9Y328 171 aa7.14□□□□□ -1.27
UBR4-216ENST00000494503 FRAS1Q86XX4 4008 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 IGHV3OR16-13A0A075B7E8 117 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 IGHV3-74A0A0B4J1X5 117 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 LOC100506127A0A0U1RQW1 187 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 NDUFA4O00483 81 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 SNAPC5O75971 98 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 EIF4EP06730 217 aaKnown RBP7.13□□□□□ -1.27
UBR4-216ENST00000494503 C8orf88P0DMB2 117 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 HSPA13P48723 471 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
UBR4-216ENST00000494503 RBMS2Q15434 407 aaKnown RBP7.13□□□□□ -1.27
UBR4-216ENST00000494503 ZNF124Q15973 351 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 SPSB3Q6PJ21 355 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 ZNF818PQ6ZRF7 136 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 ZBTB34Q8NCN2 500 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 OR1L8Q8NGR8 309 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 KIR2DL5BQ8NHK3 375 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 LSM10Q969L4 123 aaKnown RBP7.13□□□□□ -1.27
UBR4-216ENST00000494503 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 GALNT14Q96FL9 552 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 RARRES2Q99969 163 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 CHRDL1Q9BU40 450 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 EHFQ9NZC4 300 aa7.13□□□□□ -1.27
UBR4-216ENST00000494503 TEX50A0A1B0GTY4 177 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 MARCH11A6NNE9 402 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 MPTX1A8MV57 137 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 DEFB4AO15263 64 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 NUPL2O15504 423 aaKnown RBP7.12□□□□□ -1.27
UBR4-216ENST00000494503 RBFOX2O43251 390 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBR4-216ENST00000494503 KRASP01116 189 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 SERPINE2P07093 398 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 SDC2P34741 201 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 RPL11P62913 178 aaKnown RBP7.12□□□□□ -1.27
UBR4-216ENST00000494503 WT1-ASQ06250 92 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 THOC7Q6I9Y2 204 aaKnown RBP7.12□□□□□ -1.27
UBR4-216ENST00000494503 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
UBR4-216ENST00000494503 TPRA1Q86W33 373 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 HOGA1Q86XE5 327 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 C11orf45Q8TAV5 145 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 SCARB1Q8WTV0 552 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 BORCS5Q969J3 196 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 RNF2Q99496 336 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
UBR4-216ENST00000494503 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 CSTL1Q9H114 145 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 MAP6D1Q9H9H5 199 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 DIABLOQ9NR28 239 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 COMMD9Q9P000 198 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 OR51B2Q9Y5P1 312 aa7.12□□□□□ -1.27
UBR4-216ENST00000494503 DNASE2O00115 360 aaPredicted RBP7.11□□□□□ -1.27
UBR4-216ENST00000494503 CA1P00915 261 aaPredicted RBP7.11□□□□□ -1.27
UBR4-216ENST00000494503 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 CLEC2LP0C7M8 214 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 G6PCP35575 357 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 LPAR6P43657 344 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 RELQ04864 619 aaPredicted RBP7.11□□□□□ -1.27
UBR4-216ENST00000494503 CENPSQ8N2Z9 138 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
UBR4-216ENST00000494503 OR5H6Q8NGV6 325 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms