RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 HRASP01112 189 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 TRBV12-3P01733 135 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 CBX5P45973 191 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 RFX2P48378 723 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 FXYD4P59646 89 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 RHOGP84095 191 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 ATP5G2Q06055 141 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 KLF9Q13886 244 aaPredicted RBP6.16□□□□□ -1.42
RIF1-211ENST00000494333 KLF5Q13887 457 aaPredicted RBP6.16□□□□□ -1.42
RIF1-211ENST00000494333 TATDN3Q17R31 274 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 UBE2NLQ5JXB2 153 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 HAPLN4Q86UW8 402 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 ANKRD13BQ86YJ7 626 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 SPAG16Q8N0X2 631 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 TTC9CQ8N5M4 171 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 SAMD12Q8N8I0 201 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 OR9G4Q8NGQ1 327 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 VSTM2AQ8TAG5 236 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 GIMAP1Q8WWP7 306 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 SNAPC3Q92966 411 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 OR2A7Q96R45 310 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 IFT46Q9NQC8 304 aa6.16□□□□□ -1.42
RIF1-211ENST00000494333 TRBV9A0A0B4J1U6 114 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 DPPA5A6NC42 116 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 FAM223BA6NKX1 122 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 E7EUB6 86 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 SULT1C2O00338 296 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 KBTBD11O94819 623 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 IGLV1-51P01701 117 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 KIR2DS2P43631 304 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 RPL27AP46776 148 aaKnown RBP6.15□□□□□ -1.42
RIF1-211ENST00000494333 ZNF45Q02386 682 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 MSMO1Q15800 293 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 RPEL1Q2QD12 228 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 TMEM69Q5SWH9 247 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 DGAT2L7PQ6IED9 249 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 ZNF818PQ6ZRF7 136 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 SLC25A42Q86VD7 318 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 TMEM17Q86X19 198 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 SBSPONQ8IVN8 264 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 FAM223AQ8IWN6 122 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 PUSL1Q8N0Z8 303 aaKnown RBP6.15□□□□□ -1.42
RIF1-211ENST00000494333 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
RIF1-211ENST00000494333 SLC25A46Q96AG3 418 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 FUNDC2Q9BWH2 189 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 EHFQ9NZC4 300 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 COMMD3Q9UBI1 195 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 U3KQK5 164 aa6.15□□□□□ -1.42
RIF1-211ENST00000494333 SMIM31A0A1B0GVY4 71 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 TRIM64CA6NLI5 447 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 TEX22C9J3V5 150 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 OR2J3O76001 311 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 HPRT1P00492 218 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 PMP2P02689 132 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 MYOD1P15172 320 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 PRSS3P35030 304 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 MAS1LP35410 378 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 TAS2R20P59543 309 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 HERV-K104P61576 105 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 VBP1P61758 197 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 NCS1P62166 190 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 RPL8P62917 257 aaKnown RBP6.14□□□□□ -1.43
RIF1-211ENST00000494333 CATR1Q13166 79 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 C15orf32Q32M92 178 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 AADACL3Q5VUY0 350 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 OR4A47Q6IF82 309 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 DHRS11Q6UWP2 260 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 IL34Q6ZMJ4 242 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 C19orf35Q6ZS72 473 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 NECAP1Q8NC96 275 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 OR51H1Q8NH63 302 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 ZNF2Q9BSG1 426 aaPredicted RBP6.14□□□□□ -1.43
RIF1-211ENST00000494333 HRASLSQ9HDD0 168 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 SLC2A9Q9NRM0 540 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 ZNF257Q9Y2Q1 563 aa6.14□□□□□ -1.43
RIF1-211ENST00000494333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.13□□□□□ -1.43
RIF1-211ENST00000494333 TRAV3A0A0B4J244 114 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 A0A1B0GW64 132 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 NPIPB5A8MRT5 1133 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 H0Y980 276 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 BMPR1BO00238 502 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 RBFOX2O43251 390 aaKnown RBP eCLIP6.13□□□□□ -1.438e-7■■■□□ 14.6
RIF1-211ENST00000494333 EIF4EP06730 217 aaKnown RBP6.13□□□□□ -1.43
RIF1-211ENST00000494333 CSN3P07498 182 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 FRMD6-AS1P0C7T7 363 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 ZNF735P0CB33 412 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 DEFA4P12838 97 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 AREGP15514 252 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 NQO2P16083 231 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 HLA-GP17693 338 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 HLA-DMAP28067 261 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 PSMB6P28072 239 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 GNRHRP30968 328 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 PCP4P48539 62 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 TAS2R31P59538 309 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 EXOSC2Q13868 293 aaKnown RBP6.13□□□□□ -1.43
RIF1-211ENST00000494333 C10orf25Q5T742 122 aa6.13□□□□□ -1.43
RIF1-211ENST00000494333 OR5H2Q8NGV7 314 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms