RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 LHX4Q969G2 390 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 SSBP3Q9BWW4 388 aaPredicted RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 FKBP11Q9NYL4 201 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 GNG13Q9P2W3 67 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 NAV3Q8IVL0 2385 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 IGHV3-72A0A0B4J1Y9 119 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 IGHV1-3A0A0C4DH29 117 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 ODF3BA8MYP8 253 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 SEC14L6B5MCN3 397 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 M0R1W7 72 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 NUPL2O15504 423 aaKnown RBP8.59□□□□□ -1.03
CLCN6-208ENST00000494028 SLC25A17O43808 307 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 SOX15O60248 233 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 YIF1AO95070 293 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 MBP02144 154 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OPN1MWP04001 364 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 IFNA4P05014 189 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OPN1MW2P0DN77 364 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OPN1MW3P0DN78 364 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 DEFA4P12838 97 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 MC5RP33032 325 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OPRK1P41145 380 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 PRRX1P54821 245 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 KLRD1Q13241 179 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 C2orf83Q53S99 150 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 KHDC3LQ587J8 217 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 HCP5Q6MZN7 132 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 PNKDQ8N490 385 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 KIR3DL3Q8N743 410 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OR10G4Q8NGN3 311 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OR10G9Q8NGN4 311 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 OR10G7Q8NGN6 311 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 ZNF430Q9H8G1 570 aaPredicted RBP8.59□□□□□ -1.03
CLCN6-208ENST00000494028 NDUFA4L2Q9NRX3 87 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
CLCN6-208ENST00000494028 SPTBN1Q01082 2364 aaKnown RBP8.59□□□□□ -1.03
CLCN6-208ENST00000494028 A0A1W2PN81 502 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 GOSR1O95249 250 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 IFNA1P01562 189 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 IGHV2-5P01817 119 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 CRYGBP07316 175 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 RNF224P0DH78 156 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 OR13C7P0DN81 318 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 CHRNA7P36544 502 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 CDC34P49427 236 aaPredicted RBP8.58□□□□□ -1.04
CLCN6-208ENST00000494028 EFNA4P52798 201 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 ACOT6Q3I5F7 207 aaPredicted RBP8.58□□□□□ -1.04
CLCN6-208ENST00000494028 LDLRAD2Q5SZI1 272 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 TPTE2P1Q5T6R2 138 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 TMEM88Q6PEY1 159 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 IGFBPL1Q8WX77 278 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 ACTR3CQ9C0K3 210 aaPredicted RBP8.58□□□□□ -1.04
CLCN6-208ENST00000494028 SIRT7Q9NRC8 400 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 PXMP4Q9Y6I8 212 aa8.58□□□□□ -1.04
CLCN6-208ENST00000494028 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 ARHGAP32A7KAX9 2087 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 hCG_1809904A0A1W2PP81 198 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 A0A1W2PPE2 198 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 A0A1W2PR64 198 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 A0A1W2PRV1 198 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 E7EUB6 86 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 CNTFRP26992 372 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 ATP5IP56385 69 aaPredicted RBP8.57□□□□□ -1.04
CLCN6-208ENST00000494028 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 GCSAMLQ5JQS6 135 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 MIC13Q5XKP0 118 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 FAM90A2PQ658T7 463 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 SLC16A13Q7RTY0 426 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 OR11H6Q8NGC7 330 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 RPEQ96AT9 228 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 RITA1Q96K30 269 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 COMMD5Q9GZQ3 224 aa8.57□□□□□ -1.04
CLCN6-208ENST00000494028 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
CLCN6-208ENST00000494028 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 OVOL3O00110 214 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 TSPAN4O14817 238 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 HMGB3O15347 200 aaKnown RBP8.56□□□□□ -1.04
CLCN6-208ENST00000494028 ENSAO43768 121 aaKnown RBP8.56□□□□□ -1.04
CLCN6-208ENST00000494028 FBP1P09467 338 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
CLCN6-208ENST00000494028 LGALS7P47929 136 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 WT1-ASQ06250 92 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 PSG5Q15238 335 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 RHEBQ15382 184 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 PRSS8Q16651 343 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 SOHLH1Q5JUK2 328 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 MOB3BQ86TA1 216 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 STPG3Q8N7X2 389 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 TEX45Q8NA69 505 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 SSMEM1Q8WWF3 244 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 CFHR4Q92496 578 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 RAB24Q969Q5 203 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms